Variant report

Variant	rs4730976
Chromosome Location	chr7:120327563-120327564
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11984204	0.81[CEU][hapmap];0.91[CHB][hapmap];0.86[CHD][hapmap];0.85[JPT][hapmap];0.87[MEX][hapmap]
rs12538990	0.82[CHD][hapmap]
rs2189976	0.84[TSI][hapmap]
rs2189977	0.81[CEU][hapmap];0.91[CHB][hapmap];0.82[CHD][hapmap];0.85[GIH][hapmap];0.85[JPT][hapmap];0.83[MEX][hapmap]
rs4727912	0.84[TSI][hapmap]
rs4727914	0.86[CEU][hapmap];0.91[CHB][hapmap];0.86[CHD][hapmap];0.89[GIH][hapmap];0.85[JPT][hapmap];0.91[MEX][hapmap];0.93[TSI][hapmap]
rs4730972	0.81[TSI][hapmap]
rs4730977	0.81[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap]
rs4730979	0.91[CHB][hapmap];0.83[ASN][1000 genomes]
rs5009999	0.86[CEU][hapmap];0.91[CHB][hapmap];0.85[JPT][hapmap]
rs60505248	0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6466754	0.81[TSI][hapmap]
rs6466757	0.91[CHB][hapmap];0.86[CHD][hapmap];0.83[MEX][hapmap];0.82[ASN][1000 genomes]
rs7458164	0.81[CEU][hapmap];0.91[CHB][hapmap];0.81[CHD][hapmap];0.85[JPT][hapmap];0.81[MKK][hapmap];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs4730976	CAV1	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120324800-120332200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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