Variant report

Variant	rs4730979
Chromosome Location	chr7:120358871-120358872
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1012983	0.86[JPT][hapmap]
rs11489533	0.83[CHB][hapmap]
rs11984204	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs12538990	0.83[CHB][hapmap]
rs17142923	0.83[CHB][hapmap]
rs2023972	0.82[CHB][hapmap]
rs2189976	0.85[JPT][hapmap]
rs2189977	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs4727912	0.85[JPT][hapmap]
rs4727914	0.86[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs4730967	0.80[JPT][hapmap]
rs4730972	0.85[JPT][hapmap]
rs4730976	0.91[CHB][hapmap];0.83[ASN][1000 genomes]
rs4730977	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs5009999	0.86[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap]
rs60505248	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6466757	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7458164	0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7795646	0.81[JPT][hapmap]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:120355000-120361200	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr7:120355600-120359800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr7:120356000-120359400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr7:120356200-120373000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr7:120356400-120360600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr7:120357400-120369200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr7:120358200-120369400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:120358400-120359000	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr7:120358400-120359400	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr7:120358800-120360400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr7:120358800-120364600	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr7:120358800-120365400	Weak transcription	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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