Variant report

Variant	rs4734709
Chromosome Location	chr8:91379074-91379075
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:39)

rs_ID	r²[population]
rs10441528	0.83[EUR][1000 genomes]
rs12675516	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13264065	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13265958	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs16904410	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.92[GIH][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1859179	0.84[ASN][1000 genomes]
rs1859180	0.84[ASN][1000 genomes]
rs1859181	0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2005936	0.83[EUR][1000 genomes]
rs34409029	0.81[EUR][1000 genomes]
rs34482521	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34813000	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35646771	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs3924374	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3924375	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4236770	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4527927	0.92[CEU][hapmap];0.83[EUR][1000 genomes]
rs4576466	0.81[CEU][hapmap];0.81[TSI][hapmap]
rs4734084	0.83[EUR][1000 genomes]
rs4734445	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4734446	0.93[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4734704	0.83[EUR][1000 genomes]
rs4734706	0.83[EUR][1000 genomes]
rs4734718	0.82[EUR][1000 genomes]
rs55763235	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61582074	0.83[EUR][1000 genomes]
rs62530363	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6470995	0.83[EUR][1000 genomes]
rs6470998	0.83[EUR][1000 genomes]
rs6470999	0.92[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs6471000	0.83[EUR][1000 genomes]
rs6988658	0.82[EUR][1000 genomes]
rs7009336	0.83[EUR][1000 genomes]
rs7009723	0.92[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs7014679	0.92[CEU][hapmap];0.83[EUR][1000 genomes]
rs7827909	0.82[EUR][1000 genomes]
rs7829290	0.83[EUR][1000 genomes]
rs7844648	0.83[EUR][1000 genomes]
rs975976	0.83[EUR][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs4734709	RUNX1T1	cis	cerebellum	SCAN
rs4734709	MMP16	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91376600-91382600	Weak transcription	K562	blood

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