Variant report

Variant	rs4738653
Chromosome Location	chr8:59151816-59151817
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10504251	0.83[ASN][1000 genomes]
rs12546637	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12546705	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12677024	0.85[ASN][1000 genomes]
rs12680043	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs13250098	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13280150	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs34931209	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4738654	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs4738659	0.81[EUR][1000 genomes]
rs6995423	0.91[ASN][1000 genomes]
rs6995739	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6998045	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9643501	0.83[ASN][1000 genomes]
rs9643504	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59147400-59161000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr8:59150800-59155000	Weak transcription	Fetal Brain Female	brain
3	chr8:59151200-59152000	Enhancers	GM12878-XiMat	blood
4	chr8:59151400-59152000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr8:59151400-59154800	Weak transcription	Fetal Brain Male	brain
6	chr8:59151800-59152600	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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