Variant report

Variant	rs4738659
Chromosome Location	chr8:59193530-59193531
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:59188123..59190176-chr8:59192714..59194405,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10504251	0.80[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs10504252	0.82[AMR][1000 genomes]
rs12546637	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12546705	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12677024	0.90[ASN][1000 genomes]
rs12680043	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs13249017	0.92[AFR][1000 genomes];0.80[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13250098	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13272948	0.85[AMR][1000 genomes]
rs13274962	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs13280150	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16923211	0.85[CHB][hapmap]
rs34931209	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4496957	0.83[AMR][1000 genomes]
rs4737494	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4738653	0.81[EUR][1000 genomes]
rs4738654	0.85[ASN][1000 genomes]
rs4738665	0.87[ASN][1000 genomes]
rs62512350	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62512354	0.85[AMR][1000 genomes]
rs6995423	0.88[ASN][1000 genomes]
rs6995739	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6998045	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7827651	0.83[AMR][1000 genomes]
rs7837145	0.82[AMR][1000 genomes]
rs9643501	0.88[ASN][1000 genomes]
rs9643504	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59185400-59195800	Weak transcription	Right Atrium	heart
2	chr8:59191400-59196000	Weak transcription	Gastric	stomach
3	chr8:59191600-59194600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:59191600-59195800	Weak transcription	Fetal Muscle Trunk	muscle
5	chr8:59191600-59196200	Weak transcription	Hela-S3	cervix
6	chr8:59191800-59194200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr8:59192200-59193600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr8:59192400-59193600	Enhancers	Duodenum Smooth Muscle	Duodenum
9	chr8:59192600-59193600	Enhancers	Adipose Nuclei	Adipose
10	chr8:59193000-59194000	Weak transcription	Fetal Brain Female	brain
11	chr8:59193200-59195400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
12	chr8:59193400-59195400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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