Variant report

Variant	rs12677024
Chromosome Location	chr8:59186272-59186273
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10504251	0.82[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12546637	0.94[ASN][1000 genomes]
rs12546705	0.94[ASN][1000 genomes]
rs12680043	0.89[ASN][1000 genomes]
rs13249017	0.83[ASN][1000 genomes]
rs13250098	0.94[ASN][1000 genomes]
rs13280150	0.94[ASN][1000 genomes]
rs34931209	0.94[ASN][1000 genomes]
rs4738653	0.85[ASN][1000 genomes]
rs4738654	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4738659	0.90[ASN][1000 genomes]
rs4738665	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62512350	0.85[ASN][1000 genomes]
rs6995423	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6995739	0.94[ASN][1000 genomes]
rs6998045	0.94[ASN][1000 genomes]
rs9643501	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9643504	0.80[AMR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:59170800-59187800	Weak transcription	Fetal Lung	lung
2	chr8:59183600-59187200	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr8:59184000-59187400	Weak transcription	Fetal Stomach	stomach
4	chr8:59185400-59186400	Weak transcription	Fetal Muscle Leg	muscle
5	chr8:59185400-59187600	Weak transcription	HSMM	muscle
6	chr8:59185400-59193200	Weak transcription	Spleen	Spleen
7	chr8:59185400-59195800	Weak transcription	Right Atrium	heart
8	chr8:59186200-59187400	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr8:59186200-59187600	Enhancers	Fetal Muscle Trunk	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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