Variant report

Variant	rs4755314
Chromosome Location	chr11:45338998-45338999
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10742748	0.81[EUR][1000 genomes]
rs10742749	0.81[EUR][1000 genomes]
rs10769138	0.81[EUR][1000 genomes]
rs10838444	0.84[ASN][1000 genomes]
rs10838446	0.81[EUR][1000 genomes]
rs4755962	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4755965	0.87[ASN][1000 genomes]
rs4755966	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4755967	0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4755969	0.84[EUR][1000 genomes]
rs4755970	0.85[EUR][1000 genomes]
rs6416133	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6485613	0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6485614	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6485615	0.80[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs6485616	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6485619	0.82[EUR][1000 genomes]
rs7106802	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7110287	0.82[ASN][1000 genomes]
rs7112192	0.85[EUR][1000 genomes]
rs7124597	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7478974	0.81[EUR][1000 genomes]
rs7479052	0.81[EUR][1000 genomes]
rs7480542	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7483595	0.83[ASN][1000 genomes]
rs7946683	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9667484	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530619	chr11:45294176-45553928	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45326400-45344200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:45338800-45339000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links