Variant report

Variant	rs4764966
Chromosome Location	chr12:103954210-103954211
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10745973	0.92[ASN][1000 genomes]
rs10745974	0.92[ASN][1000 genomes]
rs10778263	0.97[ASN][1000 genomes]
rs10778264	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10861041	0.92[ASN][1000 genomes]
rs12832814	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1346411	0.90[ASN][1000 genomes]
rs1593810	0.81[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1593811	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1593812	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1593813	1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs17034119	0.81[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs17034127	0.89[JPT][hapmap]
rs35929067	0.81[AMR][1000 genomes]
rs4131522	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4237987	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4388997	0.96[ASN][1000 genomes]
rs6539082	0.93[ASN][1000 genomes]
rs67057049	0.90[ASN][1000 genomes]
rs7311417	0.93[ASN][1000 genomes]
rs7955950	0.95[ASN][1000 genomes]
rs7979954	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103950200-103955600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr12:103951200-103956600	Enhancers	Placenta	Placenta
3	chr12:103951600-103954600	Weak transcription	Fetal Muscle Leg	muscle
4	chr12:103952400-103956000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr12:103952800-103956800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr12:103952800-103958200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr12:103953200-103956400	Enhancers	HMEC	breast
8	chr12:103953400-103955600	Enhancers	NHDF-Ad	bronchial
9	chr12:103953600-103955400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr12:103953800-103955400	Enhancers	Osteobl	bone
11	chr12:103953800-103956800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr12:103954000-103954600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr12:103954000-103954600	Enhancers	HSMM	muscle
14	chr12:103954000-103954800	Enhancers	Muscle Satellite Cultured Cells	--
15	chr12:103954000-103954800	Enhancers	Fetal Intestine Large	intestine
16	chr12:103954000-103954800	Enhancers	Placenta Amnion	Placenta Amnion
17	chr12:103954000-103955000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
18	chr12:103954000-103955000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr12:103954000-103955200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr12:103954000-103955200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr12:103954000-103955200	Enhancers	NHLF	lung
22	chr12:103954000-103955400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr12:103954000-103955400	Enhancers	HSMMtube	muscle
24	chr12:103954000-103955400	Enhancers	NH-A	brain
25	chr12:103954000-103955800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr12:103954000-103956000	Flanking Active TSS	A549	lung
27	chr12:103954200-103954400	Flanking Active TSS	NHEK	skin

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