Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10855819	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1151599	1.00[JPT][hapmap]
rs1151602	1.00[JPT][hapmap]
rs1263240	0.94[CEU][hapmap];1.00[JPT][hapmap]
rs1263243	0.94[CEU][hapmap];1.00[JPT][hapmap]
rs1263244	0.94[CEU][hapmap];1.00[JPT][hapmap]
rs1263259	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12835261	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1341326	1.00[JPT][hapmap]
rs174164	1.00[JPT][hapmap]
rs2066449	1.00[JPT][hapmap]
rs34974916	1.00[CEU][hapmap]
rs473645	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs486485	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs499282	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs527480	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs557647	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs575348	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs5937811	1.00[CEU][hapmap];1.00[JPT][hapmap]
rs5981268	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs5981614	1.00[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3364045	chrX:72896383-73699363	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	301 gene(s)	inside rSNPs	diseases
2	nsv916758	chrX:73546406-74420929	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
3	esv2830082	chrX:73564051-73635867	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:73600200-73603000	Enhancers	Primary monocytes fromperipheralblood	blood
2	chrX:73600400-73602000	Enhancers	Monocytes-CD14+_RO01746	blood

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