Variant report

Variant	rs4870869
Chromosome Location	chr8:124852819-124852820
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:124851825..124854245-chr8:124869271..124871198,2	K562	blood:
2	chr8:124832995..124835847-chr8:124852193..124854315,2	K562	blood:
3	chr8:124852745..124855181-chr8:124869698..124872511,2	K562	blood:

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10087476	0.81[ASN][1000 genomes]
rs10481071	0.81[ASN][1000 genomes]
rs10481072	0.81[ASN][1000 genomes]
rs10481073	0.81[ASN][1000 genomes]
rs10481151	0.81[ASN][1000 genomes]
rs12155526	0.85[ASN][1000 genomes]
rs13278088	0.82[ASN][1000 genomes]
rs1367827	0.91[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs1431670	0.97[ASN][1000 genomes]
rs1431671	0.97[ASN][1000 genomes]
rs1594501	0.97[ASN][1000 genomes]
rs1821116	0.97[ASN][1000 genomes]
rs2060112	0.81[ASN][1000 genomes]
rs2116357	0.95[ASN][1000 genomes]
rs2116358	0.92[ASN][1000 genomes]
rs2272683	0.81[ASN][1000 genomes]
rs2385515	0.81[ASN][1000 genomes]
rs2385518	0.95[ASN][1000 genomes]
rs2385519	0.90[ASN][1000 genomes]
rs2385520	0.87[ASN][1000 genomes]
rs2385521	0.81[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs28495871	0.81[ASN][1000 genomes]
rs4871414	0.81[ASN][1000 genomes]
rs6470186	0.86[CHB][hapmap];0.80[ASN][1000 genomes]
rs6470190	0.96[ASN][1000 genomes]
rs6470191	0.96[ASN][1000 genomes]
rs66515434	0.81[ASN][1000 genomes]
rs67139073	0.81[ASN][1000 genomes]
rs6985019	0.82[ASN][1000 genomes]
rs6986384	0.81[ASN][1000 genomes]
rs6987803	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6998271	0.81[ASN][1000 genomes]
rs7004647	0.98[ASN][1000 genomes]
rs7014235	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs72715071	0.82[ASN][1000 genomes]
rs72715072	0.83[ASN][1000 genomes]
rs73337418	0.81[ASN][1000 genomes]
rs73337464	0.81[ASN][1000 genomes]
rs73337467	0.81[ASN][1000 genomes]
rs73337469	0.81[ASN][1000 genomes]
rs874205	0.81[ASN][1000 genomes]
rs874206	0.81[ASN][1000 genomes]
rs874207	0.81[ASN][1000 genomes]
rs9297676	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831451	chr8:124710946-124885148	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:124849400-124853400	Enhancers	Hela-S3	cervix
2	chr8:124850000-124853400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr8:124850800-124853000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr8:124850800-124853000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr8:124850800-124853400	Enhancers	Osteobl	bone
6	chr8:124850800-124853600	Enhancers	HMEC	breast
7	chr8:124850800-124853600	Enhancers	HSMM	muscle
8	chr8:124850800-124855200	Weak transcription	Aorta	Aorta
9	chr8:124851000-124853000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr8:124851000-124853200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr8:124851000-124853200	Enhancers	Muscle Satellite Cultured Cells	--
12	chr8:124851000-124853400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr8:124851200-124853600	Enhancers	NHLF	lung
14	chr8:124851400-124853200	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr8:124851400-124853200	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr8:124851600-124853000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
17	chr8:124851600-124853400	Enhancers	NHEK	skin
18	chr8:124852200-124855200	Weak transcription	Duodenum Mucosa	Duodenum
19	chr8:124852400-124853400	Enhancers	NH-A	brain
20	chr8:124852400-124853800	Enhancers	NHDF-Ad	bronchial
21	chr8:124852600-124853600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr8:124852800-124853000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr8:124852800-124856800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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