Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10092529	0.81[AFR][1000 genomes]
rs10957592	0.83[AMR][1000 genomes]
rs12386943	0.83[AMR][1000 genomes]
rs12386985	0.83[AMR][1000 genomes]
rs12679231	0.83[AFR][1000 genomes]
rs13252151	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs13278375	1.00[AMR][1000 genomes]
rs13281608	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs1385973	0.81[AFR][1000 genomes]
rs1486248	0.81[AFR][1000 genomes]
rs2171191	0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2385606	0.81[AFR][1000 genomes]
rs4548196	1.00[AMR][1000 genomes]
rs4567054	0.83[AMR][1000 genomes]
rs4644276	0.83[AMR][1000 genomes]
rs4873380	1.00[AMR][1000 genomes]
rs4873385	0.96[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6996687	1.00[AMR][1000 genomes]
rs7461601	0.82[AFR][1000 genomes]
rs7824738	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353749	chr8:50530807-51139242	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50729800-50734600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:50729800-50735200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr8:50730000-50734200	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr8:50730000-50735000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr8:50730000-50735200	Weak transcription	NH-A	brain
6	chr8:50730200-50735200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr8:50730800-50735200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr8:50731200-50734800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr8:50731200-50735400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr8:50731400-50735200	Weak transcription	NHDF-Ad	bronchial
11	chr8:50733000-50733200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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