Variant report

Variant	rs4907185
Chromosome Location	chr1:84336047-84336048
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10127737	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10465746	0.80[ASN][1000 genomes]
rs10493741	0.83[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs10874423	0.87[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs10874426	0.82[EUR][1000 genomes]
rs11163861	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11163862	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11163865	0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11163866	0.93[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11163867	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs11576870	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11580836	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12070578	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12118434	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12120160	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12127266	0.85[ASN][1000 genomes]
rs12133778	0.85[ASN][1000 genomes]
rs12135028	0.80[ASN][1000 genomes]
rs12139191	0.81[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs12140068	0.80[ASN][1000 genomes]
rs12407641	0.81[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12410617	0.81[ASN][1000 genomes]
rs12732697	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12738214	0.81[ASN][1000 genomes]
rs12748268	0.84[ASN][1000 genomes]
rs12758441	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs1324484	0.82[ASN][1000 genomes]
rs1324486	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs1359331	0.80[AFR][1000 genomes];0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1475263	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1570690	0.81[ASN][1000 genomes]
rs1570691	0.89[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs17534614	0.82[ASN][1000 genomes]
rs2024591	1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2389649	0.85[AMR][1000 genomes];0.82[ASN][1000 genomes]
rs28726372	0.89[ASN][1000 genomes]
rs4907186	0.93[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4907188	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4907189	0.82[ASN][1000 genomes]
rs5028806	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6576956	0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6692233	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6694752	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6699501	0.81[ASN][1000 genomes]
rs7529293	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9700285	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs980417	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.86[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs980418	0.81[AFR][1000 genomes];0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84326800-84348200	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr1:84326800-84352600	Weak transcription	Fetal Muscle Trunk	muscle
3	chr1:84327000-84345000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr1:84327000-84348400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr1:84327000-84352400	Weak transcription	Aorta	Aorta
6	chr1:84327000-84361800	Weak transcription	Fetal Brain Female	brain
7	chr1:84327000-84375400	Weak transcription	Brain Germinal Matrix	brain
8	chr1:84327200-84348600	Weak transcription	Stomach Smooth Muscle	stomach
9	chr1:84327200-84349600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr1:84327200-84351400	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr1:84327400-84345000	Weak transcription	Brain Anterior Caudate	brain
12	chr1:84328200-84354400	Weak transcription	Brain Substantia Nigra	brain
13	chr1:84328800-84344800	Weak transcription	Brain Hippocampus Middle	brain
14	chr1:84329000-84352200	Weak transcription	Brain Angular Gyrus	brain
15	chr1:84329000-84373000	Weak transcription	Brain Cingulate Gyrus	brain
16	chr1:84331000-84352400	Weak transcription	Fetal Muscle Leg	muscle
17	chr1:84331400-84348000	Weak transcription	HSMM	muscle
18	chr1:84333400-84382400	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr1:84334600-84355400	Weak transcription	HSMMtube	muscle
20	chr1:84334800-84342600	Weak transcription	NHLF	lung
21	chr1:84335600-84336400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr1:84335800-84352400	Weak transcription	Skeletal Muscle Male	skeletal muscle

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