Variant report

Variant rs11163867
Chromosome Location chr1:84384847-84384848
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84351000-84391400 Weak transcription Fetal Stomach stomach
2 chr1:84362600-84403200 Weak transcription Fetal Brain Male brain
3 chr1:84366400-84392800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
4 chr1:84366800-84399400 Weak transcription Skeletal Muscle Male skeletal muscle
5 chr1:84367800-84385000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:84368000-84390000 Weak transcription NH-A brain
7 chr1:84368000-84394200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr1:84368200-84393400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:84368200-84393800 Weak transcription Rectal Smooth Muscle rectum
10 chr1:84368200-84394800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr1:84368400-84416600 Weak transcription NHLF lung
12 chr1:84368400-84428400 Weak transcription Pancreas Pancrea
13 chr1:84374200-84393000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:84376200-84392800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:84376800-84405000 Weak transcription Left Ventricle heart
16 chr1:84378600-84390200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr1:84379200-84386000 Weak transcription Colon Smooth Muscle Colon
18 chr1:84380800-84387800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr1:84380800-84392200 Weak transcription NHEK skin
20 chr1:84381000-84393400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:84381000-84394800 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:84381000-84397400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr1:84381200-84386600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr1:84381200-84390000 Weak transcription Psoas Muscle Psoas
25 chr1:84382000-84387000 Strong transcription Brain Germinal Matrix brain
26 chr1:84382200-84385200 Strong transcription Fetal Muscle Trunk muscle
27 chr1:84382200-84387200 Strong transcription Fetal Brain Female brain
28 chr1:84382400-84385000 Strong transcription Brain Cingulate Gyrus brain
29 chr1:84382400-84385000 Strong transcription Skeletal Muscle Female skeletal muscle
30 chr1:84382400-84386200 Strong transcription Brain Inferior Temporal Lobe brain
31 chr1:84382400-84387000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:84382600-84385600 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr1:84382600-84409800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:84383200-84386000 Weak transcription Brain Anterior Caudate brain
35 chr1:84383200-84386000 Weak transcription Brain Substantia Nigra brain
36 chr1:84383200-84386000 Weak transcription NHDF-Ad bronchial
37 chr1:84383200-84393000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:84383200-84408600 Weak transcription Adipose Nuclei Adipose
39 chr1:84383400-84391000 Weak transcription Brain Angular Gyrus brain
40 chr1:84383600-84387600 Weak transcription Duodenum Mucosa Duodenum
41 chr1:84384200-84387000 Strong transcription Fetal Muscle Leg muscle
42 chr1:84384400-84385000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr1:84384400-84385000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:84384400-84385000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
45 chr1:84384400-84386600 Strong transcription Stomach Smooth Muscle stomach
46 chr1:84384600-84385000 Strong transcription Gastric stomach
47 chr1:84384600-84385000 Strong transcription HSMMtube muscle
48 chr1:84384600-84385200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr1:84384600-84386600 Strong transcription Brain Hippocampus Middle brain
50 chr1:84384600-84386600 Strong transcription Duodenum Smooth Muscle Duodenum

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