The 2.0 version of rSNPBase

Variant report

Variant rs12758441
Chromosome Location chr1:84352034-84352035
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84326800-84352600 Weak transcription Fetal Muscle Trunk muscle
2 chr1:84327000-84352400 Weak transcription Aorta Aorta
3 chr1:84327000-84361800 Weak transcription Fetal Brain Female brain
4 chr1:84327000-84375400 Weak transcription Brain Germinal Matrix brain
5 chr1:84328200-84354400 Weak transcription Brain Substantia Nigra brain
6 chr1:84329000-84352200 Weak transcription Brain Angular Gyrus brain
7 chr1:84329000-84373000 Weak transcription Brain Cingulate Gyrus brain
8 chr1:84331000-84352400 Weak transcription Fetal Muscle Leg muscle
9 chr1:84333400-84382400 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr1:84334600-84355400 Weak transcription HSMMtube muscle
11 chr1:84335800-84352400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:84338800-84367600 Weak transcription Pancreas Pancrea
13 chr1:84341000-84359400 Weak transcription Psoas Muscle Psoas
14 chr1:84341200-84380400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr1:84343600-84361800 Weak transcription Fetal Brain Male brain
16 chr1:84345600-84384400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr1:84345800-84353800 Weak transcription Brain Hippocampus Middle brain
18 chr1:84346800-84382400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:84349200-84355200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:84349600-84352800 Weak transcription Colon Smooth Muscle Colon
21 chr1:84349800-84355400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:84349800-84365000 Weak transcription Stomach Smooth Muscle stomach
23 chr1:84349800-84365800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr1:84349800-84380400 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:84350000-84352400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:84350000-84366000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:84350000-84366000 Weak transcription NHDF-Ad bronchial
28 chr1:84350200-84355200 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr1:84350200-84363000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:84350200-84363000 Weak transcription NHEK skin
31 chr1:84351000-84391400 Weak transcription Fetal Stomach stomach
32 chr1:84351400-84353400 Strong transcription Brain Inferior Temporal Lobe brain
33 chr1:84351800-84352800 Strong transcription Brain Anterior Caudate brain
34 chr1:84351800-84355400 Weak transcription Adipose Nuclei Adipose
35 chr1:84352000-84352600 Enhancers ES-WA7 Cell Line embryonic stem cell
36 chr1:84352000-84353000 Strong transcription HSMM muscle
37 chr1:84352000-84355400 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015