Variant report

Variant rs6670658
Chromosome Location chr1:84461268-84461269
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84446200-84461800 Weak transcription Aorta Aorta
2 chr1:84451200-84464000 Weak transcription Pancreas Pancrea
3 chr1:84451400-84462200 Weak transcription Stomach Mucosa stomach
4 chr1:84452600-84462200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:84452600-84462200 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr1:84452600-84464000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr1:84453400-84462400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:84454000-84464000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:84455600-84462200 Weak transcription Rectal Smooth Muscle rectum
10 chr1:84458200-84462200 Weak transcription Fetal Brain Female brain
11 chr1:84458800-84463800 Weak transcription Fetal Muscle Leg muscle
12 chr1:84459400-84461400 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr1:84460000-84465600 Active TSS Brain Anterior Caudate brain
14 chr1:84460400-84461400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
15 chr1:84460400-84462200 Weak transcription HSMM muscle
16 chr1:84460400-84464000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:84460600-84461400 Flanking Active TSS Brain Inferior Temporal Lobe brain
18 chr1:84460800-84462000 Weak transcription Brain Angular Gyrus brain
19 chr1:84461000-84461400 Enhancers Gastric stomach
20 chr1:84461000-84461400 Enhancers Stomach Smooth Muscle stomach
21 chr1:84461200-84461400 Enhancers Brain Germinal Matrix brain
22 chr1:84461200-84461800 Weak transcription Brain Substantia Nigra brain
23 chr1:84461200-84462000 Enhancers Brain Hippocampus Middle brain
24 chr1:84461200-84463000 Weak transcription Fetal Brain Male brain
25 chr1:84461200-84465600 Active TSS Brain Cingulate Gyrus brain

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