Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:10554356..10555938-chr11:10584656..10587351,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10219205	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10219352	0.91[ASN][1000 genomes]
rs1062912	0.95[ASN][1000 genomes]
rs10840438	0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10840440	0.91[ASN][1000 genomes]
rs10840441	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11042875	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11042876	0.90[ASN][1000 genomes]
rs11042877	0.92[ASN][1000 genomes]
rs11042879	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11042882	0.86[ASN][1000 genomes]
rs12288969	0.86[ASN][1000 genomes]
rs16907989	0.97[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1964537	0.89[ASN][1000 genomes]
rs2288236	0.85[ASN][1000 genomes]
rs3741034	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7115310	0.84[ASN][1000 genomes]
rs7118551	0.92[ASN][1000 genomes]
rs7126245	0.82[ASN][1000 genomes]
rs7358373	0.92[ASN][1000 genomes]
rs746164	0.90[ASN][1000 genomes]
rs7941294	0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs918981	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430319	chr11:10027543-10711224	Enhancers Weak transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:10573000-10603200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:10576000-10585800	Weak transcription	Placenta	Placenta
3	chr11:10578200-10590000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr11:10578600-10585400	Weak transcription	Fetal Stomach	stomach
5	chr11:10580000-10585800	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr11:10580400-10588000	Weak transcription	Liver	Liver
7	chr11:10580400-10590000	Weak transcription	Ovary	ovary
8	chr11:10580600-10609800	Weak transcription	Thymus	Thymus
9	chr11:10582200-10586000	Weak transcription	Primary B cells from cord blood	blood
10	chr11:10583000-10588000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr11:10583000-10600000	Weak transcription	Fetal Intestine Large	intestine
12	chr11:10583200-10588200	Weak transcription	HUVEC	blood vessel
13	chr11:10583200-10601800	Weak transcription	Fetal Intestine Small	intestine
14	chr11:10583600-10595800	Weak transcription	Colon Smooth Muscle	Colon
15	chr11:10583800-10585000	Weak transcription	Spleen	Spleen
16	chr11:10583800-10587600	Enhancers	Primary B cells from peripheral blood	blood
17	chr11:10584000-10586000	Weak transcription	Adipose Nuclei	Adipose
18	chr11:10584000-10589800	Weak transcription	Lung	lung
19	chr11:10584000-10591200	Weak transcription	Aorta	Aorta
20	chr11:10584200-10586000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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