Variant report

Variant	rs4915726
Chromosome Location	chr1:61478946-61478947
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr1:61471301..61473154-chr1:61477141..61479867,2	K562	blood:
2	chr1:61476462..61479205-chr1:61494512..61496512,2	K562	blood:
3	chr1:61462708..61464642-chr1:61477836..61480328,2	K562	blood:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11207692	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12130085	0.82[CHB][hapmap];1.00[JPT][hapmap]
rs12403525	1.00[CEU][hapmap]
rs12404093	1.00[CHB][hapmap];0.84[JPT][hapmap]
rs1573249	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17121533	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17376392	1.00[CEU][hapmap];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4915584	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4915585	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4915725	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs904271	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs924274	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:61472000-61479000	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr1:61472400-61479000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr1:61474400-61480200	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr1:61474600-61479000	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr1:61476600-61480000	Enhancers	Brain Germinal Matrix	brain
6	chr1:61477200-61479600	Enhancers	Aorta	Aorta
7	chr1:61477600-61479200	Enhancers	Left Ventricle	heart
8	chr1:61477600-61479400	Enhancers	Fetal Muscle Leg	muscle
9	chr1:61477600-61480400	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr1:61477600-61480400	Enhancers	Psoas Muscle	Psoas
11	chr1:61477800-61479000	Weak transcription	Brain Substantia Nigra	brain
12	chr1:61477800-61479000	Weak transcription	Fetal Brain Female	brain
13	chr1:61477800-61479000	Weak transcription	Right Atrium	heart
14	chr1:61477800-61479400	Enhancers	iPS-15b Cell Line	embryonic stem cell
15	chr1:61477800-61479600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr1:61477800-61480400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr1:61478200-61479400	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr1:61478200-61479600	Enhancers	Stomach Smooth Muscle	stomach
19	chr1:61478200-61481600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr1:61478400-61479400	Enhancers	Fetal Heart	heart
21	chr1:61478400-61479800	Flanking Active TSS	K562	blood
22	chr1:61478400-61480200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
23	chr1:61478400-61480200	Enhancers	HSMMtube	muscle
24	chr1:61478600-61479600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
25	chr1:61478600-61479800	Enhancers	Fetal Brain Male	brain
26	chr1:61478800-61480400	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr1:61478800-61480400	Enhancers	Skeletal Muscle Female	skeletal muscle

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