Variant report

Variant	rs12404093
Chromosome Location	chr1:61533260-61533261
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11207690	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11207691	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11207692	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11207694	0.82[AFR][1000 genomes];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12130085	1.00[CEU][hapmap];0.86[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.82[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12402756	0.82[CEU][hapmap]
rs12406426	0.81[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12409737	0.83[YRI][hapmap]
rs12565220	0.82[CEU][hapmap]
rs1573249	0.92[JPT][hapmap]
rs17121533	0.86[CHB][hapmap];0.92[JPT][hapmap]
rs2051153	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4915584	0.86[CHB][hapmap];0.93[JPT][hapmap]
rs4915585	0.93[JPT][hapmap]
rs4915725	0.86[CHB][hapmap];1.00[JPT][hapmap]
rs4915726	1.00[CHB][hapmap];0.84[JPT][hapmap]
rs4915730	0.83[YRI][hapmap]
rs904271	1.00[JPT][hapmap]
rs924274	0.86[CHB][hapmap];1.00[JPT][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:61532800-61533600	Enhancers	Placenta	Placenta
2	chr1:61532800-61533600	Enhancers	K562	blood
3	chr1:61533000-61533400	Enhancers	Skeletal Muscle Female	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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