Variant report

Variant	rs4948779
Chromosome Location	chr10:44294515-44294516
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10793499	0.83[ASN][1000 genomes]
rs10899905	0.87[ASN][1000 genomes]
rs10899907	1.00[ASN][1000 genomes]
rs10899908	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10899911	0.97[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs10899912	0.93[ASN][1000 genomes]
rs10899914	0.89[ASN][1000 genomes]
rs10899915	0.89[ASN][1000 genomes]
rs11238713	0.92[ASN][1000 genomes]
rs2863761	1.00[ASN][1000 genomes]
rs3750725	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4948776	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7071189	0.89[ASN][1000 genomes]
rs7093062	0.89[ASN][1000 genomes]
rs7093194	0.89[ASN][1000 genomes]
rs751464	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs751466	1.00[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44277800-44295000	Weak transcription	Spleen	Spleen
2	chr10:44286000-44302600	Weak transcription	Aorta	Aorta
3	chr10:44290000-44294600	Weak transcription	NHDF-Ad	bronchial
4	chr10:44290000-44300600	Weak transcription	Osteobl	bone
5	chr10:44290000-44303200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr10:44290800-44296400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr10:44292600-44304800	Weak transcription	Fetal Muscle Leg	muscle
8	chr10:44292800-44294600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr10:44293000-44295400	Weak transcription	Fetal Lung	lung
10	chr10:44293400-44300800	Weak transcription	Right Atrium	heart
11	chr10:44293400-44304600	Weak transcription	Ovary	ovary
12	chr10:44294200-44294800	Weak transcription	Left Ventricle	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links