Variant report

Variant	rs751464
Chromosome Location	chr10:44292364-44292365
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10793499	0.83[ASN][1000 genomes]
rs10899905	0.87[ASN][1000 genomes]
rs10899907	1.00[ASN][1000 genomes]
rs10899908	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs10899911	0.90[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs10899912	0.93[ASN][1000 genomes]
rs10899914	0.89[ASN][1000 genomes]
rs10899915	0.89[ASN][1000 genomes]
rs11238713	0.92[ASN][1000 genomes]
rs2863761	1.00[ASN][1000 genomes]
rs3750725	1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4948776	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4948779	0.93[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7071189	0.89[ASN][1000 genomes]
rs7093062	0.89[ASN][1000 genomes]
rs7093194	0.89[ASN][1000 genomes]
rs751466	1.00[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs751464	GPRIN2	cis	parietal	SCAN

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:44277800-44295000	Weak transcription	Spleen	Spleen
2	chr10:44286000-44302600	Weak transcription	Aorta	Aorta
3	chr10:44286800-44292400	Weak transcription	Ovary	ovary
4	chr10:44290000-44294600	Weak transcription	NHDF-Ad	bronchial
5	chr10:44290000-44300600	Weak transcription	Osteobl	bone
6	chr10:44290000-44303200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr10:44290800-44296400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr10:44292000-44293000	Enhancers	Fetal Lung	lung
9	chr10:44292200-44292600	Enhancers	Liver	Liver
10	chr10:44292200-44292600	Enhancers	Fetal Muscle Leg	muscle
11	chr10:44292200-44292800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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