Variant report

Variant	rs4958283
Chromosome Location	chr5:151282543-151282544
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:151281430..151283581-chr5:151299945..151301618,2	K562	blood:
2	chr5:151275299..151277961-chr5:151280743..151282793,2	K562	blood:

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1366236	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2071220	0.92[CEU][hapmap];0.81[CHB][hapmap];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2071221	1.00[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4467698	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6877199	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72802240	0.86[ASN][1000 genomes]
rs7349787	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7708145	0.98[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7712434	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7729457	1.00[CHB][hapmap];0.86[JPT][hapmap];0.88[ASN][1000 genomes]
rs991738	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:151276400-151285200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr5:151276600-151285200	Weak transcription	Fetal Muscle Leg	muscle
3	chr5:151276800-151284400	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr5:151276800-151284400	Weak transcription	NH-A	brain
5	chr5:151278600-151286000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr5:151279200-151282800	Enhancers	Fetal Lung	lung
7	chr5:151279600-151285200	Weak transcription	HSMM	muscle
8	chr5:151280800-151285400	Enhancers	GM12878-XiMat	blood
9	chr5:151281000-151284000	Weak transcription	Fetal Stomach	stomach
10	chr5:151281000-151284400	Weak transcription	HSMMtube	muscle
11	chr5:151281000-151285200	Weak transcription	Aorta	Aorta
12	chr5:151281200-151284400	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr5:151281400-151285200	Weak transcription	NHDF-Ad	bronchial
14	chr5:151281600-151282600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr5:151281600-151283000	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
16	chr5:151281600-151283200	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
17	chr5:151281800-151282600	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
18	chr5:151282000-151283800	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
19	chr5:151282200-151282600	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
20	chr5:151282400-151282600	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
21	chr5:151282400-151283200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr5:151282400-151283200	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
23	chr5:151282400-151284000	Bivalent Enhancer	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr5:151282400-151284400	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell

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