Variant report

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs1036347	0.90[AFR][1000 genomes];0.97[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11659633	0.93[ASN][1000 genomes]
rs11659653	0.97[ASN][1000 genomes]
rs11661781	0.93[ASN][1000 genomes]
rs11662694	0.86[ASN][1000 genomes]
rs11664654	0.81[ASN][1000 genomes]
rs12956867	0.97[ASN][1000 genomes]
rs12968905	0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1434503	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1434504	0.95[ASN][1000 genomes]
rs16953105	0.94[ASN][1000 genomes]
rs16953140	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17734689	0.93[ASN][1000 genomes]
rs2000831	0.96[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2004310	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2164100	0.90[ASN][1000 genomes]
rs62095733	0.82[ASN][1000 genomes]
rs62097072	0.90[ASN][1000 genomes]
rs62097077	0.99[ASN][1000 genomes]
rs62097078	0.99[ASN][1000 genomes]
rs6507741	0.93[ASN][1000 genomes]
rs6507742	0.95[ASN][1000 genomes]
rs7235819	0.94[ASN][1000 genomes]
rs72916595	0.89[ASN][1000 genomes]
rs7351047	0.94[ASN][1000 genomes]
rs748509	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs751393	0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs8097518	0.93[ASN][1000 genomes]
rs892576	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs892577	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9954408	0.93[ASN][1000 genomes]
rs9956945	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833641	chr18:44815063-45020202	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
2	nsv517425	chr18:44983381-44998024	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:44980400-44988800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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