Variant report

Variant rs4988336
Chromosome Location chr19:52468278-52468279
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52463400-52488200 ZNF genes & repeats Adipose Nuclei Adipose
2 chr19:52463400-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr19:52463400-52489000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
4 chr19:52463800-52488200 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
5 chr19:52464400-52469800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
6 chr19:52464400-52480000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
7 chr19:52464400-52488200 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
8 chr19:52464400-52488400 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
9 chr19:52464400-52488800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
10 chr19:52464600-52479800 ZNF genes & repeats Rectal Mucosa Donor 31 rectum
11 chr19:52464600-52483800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr19:52464600-52488000 ZNF genes & repeats Duodenum Mucosa Duodenum
13 chr19:52464600-52488800 ZNF genes & repeats Liver Liver
14 chr19:52464800-52468400 Strong transcription Dnd41 blood
15 chr19:52464800-52478600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr19:52465000-52478600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr19:52465000-52478600 ZNF genes & repeats Primary B cells from cord blood blood
18 chr19:52465000-52483600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
19 chr19:52465000-52488800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:52465200-52483600 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
21 chr19:52465200-52485000 ZNF genes & repeats Ovary ovary
22 chr19:52465200-52485200 ZNF genes & repeats Fetal Lung lung
23 chr19:52465200-52489000 ZNF genes & repeats Primary hematopoietic stem cells blood
24 chr19:52465200-52489000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
25 chr19:52465200-52489000 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
26 chr19:52465400-52468400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr19:52465400-52488600 ZNF genes & repeats Primary T cells from cord blood blood
28 chr19:52465600-52469800 ZNF genes & repeats Psoas Muscle Psoas
29 chr19:52465800-52488200 ZNF genes & repeats Primary T helper cells PMA-I stimulated --
30 chr19:52466400-52469200 ZNF genes & repeats Brain Angular Gyrus brain
31 chr19:52466400-52469600 Strong transcription Placenta Placenta
32 chr19:52466400-52484800 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
33 chr19:52466600-52478600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
34 chr19:52466600-52478600 ZNF genes & repeats Colon Smooth Muscle Colon
35 chr19:52466600-52485200 ZNF genes & repeats Primary T helper naive cells fromperipheralblood blood
36 chr19:52466600-52489000 ZNF genes & repeats Primary B cells from peripheral blood blood
37 chr19:52466800-52472600 ZNF genes & repeats Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
38 chr19:52466800-52481400 ZNF genes & repeats Primary T cells fromperipheralblood blood
39 chr19:52467000-52469000 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr19:52467000-52473200 ZNF genes & repeats Primary T helper memory cells from peripheral blood 2 blood
41 chr19:52467200-52469200 ZNF genes & repeats Brain Cingulate Gyrus brain
42 chr19:52467200-52472000 ZNF genes & repeats Stomach Smooth Muscle stomach
43 chr19:52467200-52473000 ZNF genes & repeats Primary T killer memory cells from peripheral blood blood
44 chr19:52467200-52478400 ZNF genes & repeats Primary T helper memory cells from peripheral blood 1 blood
45 chr19:52467200-52479800 ZNF genes & repeats Fetal Intestine Large intestine
46 chr19:52467200-52480000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr19:52467200-52485000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
48 chr19:52467200-52485200 ZNF genes & repeats Fetal Brain Female brain
49 chr19:52467400-52469200 ZNF genes & repeats Brain Inferior Temporal Lobe brain
50 chr19:52467400-52474200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin

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