Variant report

Variant rs12327781
Chromosome Location chr19:52597910-52597911
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52583600-52599600 ZNF genes & repeats GM12878-XiMat blood
2 chr19:52595800-52598000 ZNF genes & repeats A549 lung
3 chr19:52596400-52599400 Active TSS Muscle Satellite Cultured Cells --
4 chr19:52596400-52599600 Active TSS iPS-15b Cell Line embryonic stem cell
5 chr19:52596800-52598000 Flanking Active TSS Duodenum Smooth Muscle Duodenum
6 chr19:52597000-52598000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
7 chr19:52597000-52598000 Enhancers Primary B cells from peripheral blood blood
8 chr19:52597000-52598000 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr19:52597000-52598000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
10 chr19:52597000-52598000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
11 chr19:52597000-52598000 Flanking Active TSS HUVEC blood vessel
12 chr19:52597000-52598200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
13 chr19:52597000-52598200 Flanking Active TSS Fetal Brain Male brain
14 chr19:52597000-52598200 Enhancers Spleen Spleen
15 chr19:52597000-52598400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr19:52597000-52598400 Flanking Active TSS Stomach Smooth Muscle stomach
17 chr19:52597000-52598600 Flanking Active TSS Brain Germinal Matrix brain
18 chr19:52597000-52599200 Active TSS H9 Cell Line embryonic stem cell
19 chr19:52597000-52599200 Active TSS HUES64 Cell Line embryonic stem cell
20 chr19:52597000-52599400 Active TSS H1 Cell Line embryonic stem cell
21 chr19:52597000-52599400 Active TSS Fetal Kidney kidney
22 chr19:52597000-52599400 Active TSS HSMMtube muscle
23 chr19:52597000-52599600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
24 chr19:52597000-52599600 Active TSS NHDF-Ad bronchial
25 chr19:52597000-52599600 Active TSS NHLF lung
26 chr19:52597200-52598000 Enhancers Primary T cells fromperipheralblood blood
27 chr19:52597200-52598000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
28 chr19:52597200-52598000 Flanking Active TSS Brain Anterior Caudate brain
29 chr19:52597200-52598200 Enhancers Primary neutrophils fromperipheralblood blood
30 chr19:52597200-52598200 Active TSS Colonic Mucosa Colon
31 chr19:52597200-52598400 Flanking Active TSS Brain Inferior Temporal Lobe brain
32 chr19:52597200-52598600 Flanking Active TSS Adipose Nuclei Adipose
33 chr19:52597200-52599000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
34 chr19:52597200-52599200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr19:52597200-52599200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
36 chr19:52597200-52599400 Active TSS ES-I3 Cell Line embryonic stem cell
37 chr19:52597200-52599400 ZNF genes & repeats Primary monocytes fromperipheralblood blood
38 chr19:52597200-52599400 Active TSS Right Ventricle heart
39 chr19:52597200-52599400 Active TSS HSMM muscle
40 chr19:52597200-52599600 Active TSS Pancreatic Islets Pancreatic Islet
41 chr19:52597200-52599600 Active TSS Pancreas Pancrea
42 chr19:52597400-52598000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
43 chr19:52597400-52598000 Flanking Active TSS Right Atrium heart
44 chr19:52597400-52598000 Flanking Active TSS Dnd41 blood
45 chr19:52597400-52598000 Flanking Active TSS Hela-S3 cervix
46 chr19:52597400-52598200 Flanking Active TSS Fetal Stomach stomach
47 chr19:52597400-52598400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
48 chr19:52597400-52598400 Flanking Active TSS Liver Liver
49 chr19:52597400-52598400 Flanking Active TSS Brain Hippocampus Middle brain
50 chr19:52597400-52598400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain

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