Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11820135	1.00[EUR][1000 genomes]
rs475053	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs501594	1.00[EUR][1000 genomes]
rs55813757	1.00[EUR][1000 genomes]
rs56867396	1.00[EUR][1000 genomes]
rs57247740	1.00[EUR][1000 genomes]
rs57518967	1.00[EUR][1000 genomes]
rs577327	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs597483	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60168208	1.00[EUR][1000 genomes]
rs60590185	1.00[EUR][1000 genomes]
rs60645099	1.00[EUR][1000 genomes]
rs61997169	1.00[EUR][1000 genomes]
rs655995	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7103797	1.00[EUR][1000 genomes]
rs7123161	1.00[EUR][1000 genomes]
rs7128461	1.00[EUR][1000 genomes]
rs7935128	1.00[EUR][1000 genomes]
rs7939687	1.00[EUR][1000 genomes]
rs7942307	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051171	chr11:62987064-63835715	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv1053585	chr11:63057767-63180308	Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv555178	chr11:63078742-63197930	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv1822068	chr11:63146055-63239984	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63155600-63162800	Weak transcription	Liver	Liver

Quick Search: