Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11820135	1.00[EUR][1000 genomes]
rs475053	1.00[EUR][1000 genomes]
rs501594	1.00[EUR][1000 genomes]
rs507893	1.00[EUR][1000 genomes]
rs55813757	1.00[EUR][1000 genomes]
rs56867396	1.00[EUR][1000 genomes]
rs57247740	1.00[EUR][1000 genomes]
rs57518967	1.00[EUR][1000 genomes]
rs577327	1.00[EUR][1000 genomes]
rs597483	1.00[EUR][1000 genomes]
rs60168208	1.00[EUR][1000 genomes]
rs60590185	1.00[EUR][1000 genomes]
rs60645099	1.00[EUR][1000 genomes]
rs61997169	1.00[EUR][1000 genomes]
rs655995	1.00[EUR][1000 genomes]
rs7103797	1.00[EUR][1000 genomes]
rs7123161	1.00[EUR][1000 genomes]
rs7128461	1.00[EUR][1000 genomes]
rs7935128	1.00[EUR][1000 genomes]
rs7942307	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1051171	chr11:62987064-63835715	Genic enhancers Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	100 gene(s)	inside rSNPs	diseases
2	nsv555178	chr11:63078742-63197930	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	esv1822068	chr11:63146055-63239984	Weak transcription Enhancers Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	esv3434037	chr11:63170556-63217699	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:63184600-63187000	Enhancers	Primary T helper cells PMA-I stimulated	--
2	chr11:63185200-63187000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
3	chr11:63185200-63187000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
4	chr11:63186000-63187000	Enhancers	Primary T cells fromperipheralblood	blood

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