The 2.0 version of rSNPBase

Variant report

Variant rs519785
Chromosome Location chr12:121238935-121238936
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121211400-121260800 Weak transcription Gastric stomach
2 chr12:121221000-121250000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr12:121221200-121249400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr12:121221400-121240800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr12:121222200-121274000 Weak transcription Lung lung
6 chr12:121222400-121240400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr12:121222600-121249200 Weak transcription Rectal Smooth Muscle rectum
8 chr12:121222600-121259000 Weak transcription Ovary ovary
9 chr12:121222600-121260800 Weak transcription Spleen Spleen
10 chr12:121222600-121268600 Weak transcription Esophagus oesophagus
11 chr12:121222600-121268600 Weak transcription Stomach Smooth Muscle stomach
12 chr12:121222800-121240600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr12:121222800-121245600 Weak transcription Primary neutrophils fromperipheralblood blood
14 chr12:121222800-121249400 Weak transcription HSMM muscle
15 chr12:121228600-121239400 Weak transcription Liver Liver
16 chr12:121229000-121245200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr12:121230000-121239000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr12:121230000-121255200 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr12:121234000-121240200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr12:121234000-121240600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr12:121234000-121240800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr12:121234000-121264200 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr12:121234200-121246000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr12:121234200-121246000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr12:121234200-121246600 Weak transcription Fetal Stomach stomach
26 chr12:121234200-121246800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr12:121234600-121239000 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr12:121234600-121245800 Weak transcription Fetal Muscle Trunk muscle
29 chr12:121234600-121246000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr12:121234600-121247200 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr12:121234600-121250600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr12:121234600-121263000 Weak transcription A549 lung
33 chr12:121234800-121245400 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr12:121234800-121246200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr12:121234800-121246600 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr12:121234800-121246800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr12:121234800-121250600 Weak transcription Fetal Brain Female brain
38 chr12:121235000-121242200 Weak transcription Primary hematopoietic stem cells blood
39 chr12:121235000-121246000 Weak transcription Primary T cells fromperipheralblood blood
40 chr12:121235000-121249600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr12:121235200-121245200 Weak transcription Primary monocytes fromperipheralblood blood
42 chr12:121235600-121239200 Enhancers Fetal Thymus thymus
43 chr12:121235600-121239400 Enhancers Primary T helper cells PMA-I stimulated --
44 chr12:121235800-121239000 Enhancers Brain Anterior Caudate brain
45 chr12:121236400-121259000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr12:121236600-121239400 Enhancers Brain Substantia Nigra brain
47 chr12:121236600-121239600 Enhancers Fetal Intestine Small intestine
48 chr12:121236800-121239800 Enhancers Placenta Amnion Placenta Amnion
49 chr12:121236800-121246200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr12:121236800-121247000 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015