The 2.0 version of rSNPBase

Variant report

Variant rs61624288
Chromosome Location chr12:121166455-121166456
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121164000-121177000 Weak transcription Aorta Aorta
2 chr12:121164200-121167200 Weak transcription Ovary ovary
3 chr12:121164200-121167400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr12:121164200-121167400 Weak transcription Brain Germinal Matrix brain
5 chr12:121164200-121169800 Weak transcription NH-A brain
6 chr12:121164200-121170800 Weak transcription HUES64 Cell Line embryonic stem cell
7 chr12:121164200-121172600 Weak transcription HSMMtube muscle
8 chr12:121164200-121176400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr12:121164400-121166600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr12:121164400-121167600 Weak transcription Fetal Lung lung
11 chr12:121164400-121168000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr12:121164400-121168200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr12:121164400-121168200 Weak transcription Gastric stomach
14 chr12:121164400-121168200 Weak transcription Osteobl bone
15 chr12:121164400-121168400 Weak transcription Fetal Brain Male brain
16 chr12:121164400-121169000 Weak transcription Brain Angular Gyrus brain
17 chr12:121164400-121169800 Weak transcription HSMM muscle
18 chr12:121164400-121170400 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr12:121164400-121170400 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr12:121164400-121170600 Weak transcription NHDF-Ad bronchial
21 chr12:121164400-121170800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr12:121164400-121170800 Weak transcription Muscle Satellite Cultured Cells --
23 chr12:121164400-121174800 Weak transcription Esophagus oesophagus
24 chr12:121164400-121176000 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr12:121164400-121176600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr12:121164400-121177600 Weak transcription H9 Cell Line embryonic stem cell
27 chr12:121164400-121179600 Weak transcription Primary B cells from peripheral blood blood
28 chr12:121164600-121166800 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr12:121164600-121167200 Weak transcription Primary T cells from cord blood blood
30 chr12:121164600-121167400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr12:121164600-121167600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr12:121164600-121167600 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr12:121164600-121168000 Weak transcription Fetal Brain Female brain
34 chr12:121164600-121168200 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr12:121164600-121168200 Weak transcription Colon Smooth Muscle Colon
36 chr12:121164600-121168200 Weak transcription Placenta Amnion Placenta Amnion
37 chr12:121164600-121168600 Weak transcription NHEK skin
38 chr12:121164600-121169000 Strong transcription Fetal Muscle Trunk muscle
39 chr12:121164600-121172600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr12:121164600-121177000 Weak transcription Small Intestine intestine
41 chr12:121164600-121177200 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr12:121164600-121178000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr12:121164800-121166600 Weak transcription Fetal Thymus thymus
44 chr12:121164800-121166800 Genic enhancers Sigmoid Colon Sigmoid Colon
45 chr12:121164800-121167400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr12:121164800-121167600 Weak transcription Primary hematopoietic stem cells blood
47 chr12:121164800-121168200 Weak transcription Brain Substantia Nigra brain
48 chr12:121164800-121169000 Strong transcription Thymus Thymus
49 chr12:121164800-121169200 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr12:121164800-121169400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015