Variant report

Variant rs542530913
Chromosome Location chr11:33398365-33398366
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:33396800-33398600 Active TSS H9 Cell Line embryonic stem cell
2 chr11:33397000-33398600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr11:33397000-33398600 Bivalent/Poised TSS Rectal Smooth Muscle rectum
4 chr11:33397000-33398800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
5 chr11:33397000-33398800 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr11:33397000-33398800 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
7 chr11:33397000-33398800 Active TSS HSMM muscle
8 chr11:33397000-33399000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
9 chr11:33397000-33399600 Active TSS HSMMtube muscle
10 chr11:33397000-33399800 Active TSS Brain Anterior Caudate brain
11 chr11:33397200-33398400 Bivalent/Poised TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr11:33397200-33398400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr11:33397200-33398400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
14 chr11:33397200-33398400 Active TSS ES-UCSF4 Cell Line embryonic stem cell
15 chr11:33397200-33398400 Bivalent Enhancer Placenta Amnion Placenta Amnion
16 chr11:33397200-33398600 Active TSS ES-WA7 Cell Line embryonic stem cell
17 chr11:33397200-33398600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr11:33397200-33398600 Bivalent Enhancer Primary B cells from cord blood blood
19 chr11:33397200-33398600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
20 chr11:33397200-33398600 Active TSS Osteobl bone
21 chr11:33397200-33398800 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr11:33397200-33398800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
23 chr11:33397200-33398800 Active TSS A549 lung
24 chr11:33397200-33399000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
25 chr11:33397200-33399000 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
26 chr11:33397200-33399000 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
27 chr11:33397200-33399200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr11:33397200-33399200 Active TSS NHDF-Ad bronchial
29 chr11:33397200-33400400 Active TSS Brain Angular Gyrus brain
30 chr11:33397200-33400800 Active TSS Brain Inferior Temporal Lobe brain
31 chr11:33397400-33398400 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr11:33397400-33398400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
33 chr11:33397400-33398400 Active TSS Cortex derived primary cultured neurospheres brain
34 chr11:33397400-33398400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr11:33397400-33398400 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr11:33397400-33398400 Bivalent/Poised TSS Esophagus oesophagus
37 chr11:33397400-33398400 Bivalent/Poised TSS Fetal Muscle Leg muscle
38 chr11:33397400-33398400 Active TSS Ovary ovary
39 chr11:33397400-33398400 Bivalent/Poised TSS Skeletal Muscle Male skeletal muscle
40 chr11:33397400-33398400 Active TSS Skeletal Muscle Female skeletal muscle
41 chr11:33397400-33398400 Active TSS GM12878-XiMat blood
42 chr11:33397400-33398400 Bivalent/Poised TSS HepG2 liver
43 chr11:33397400-33398600 Active TSS Breast Myoepithelial Primary Cells Breast
44 chr11:33397400-33398600 Flanking Active TSS Primary hematopoietic stem cells blood
45 chr11:33397400-33398600 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr11:33397400-33398600 Active TSS Muscle Satellite Cultured Cells --
47 chr11:33397400-33398600 Active TSS Aorta Aorta
48 chr11:33397400-33398600 Active TSS Brain Substantia Nigra brain
49 chr11:33397400-33398600 Active TSS Duodenum Mucosa Duodenum
50 chr11:33397400-33398600 Bivalent/Poised TSS Thymus Thymus

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