Variant report

Variant rs554294094
Chromosome Location chr9:140499654-140499655
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:140497600-140500200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr9:140498000-140500000 Weak transcription Primary neutrophils fromperipheralblood blood
3 chr9:140498600-140500200 Enhancers Adipose Nuclei Adipose
4 chr9:140498800-140500400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
5 chr9:140498800-140500800 Active TSS Esophagus oesophagus
6 chr9:140498800-140500800 Active TSS Rectal Mucosa Donor 31 rectum
7 chr9:140498800-140501000 Active TSS HSMM muscle
8 chr9:140499000-140500200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
9 chr9:140499000-140500200 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
10 chr9:140499000-140500200 Active TSS Primary mononuclear cells fromperipheralblood Blood
11 chr9:140499000-140500200 Active TSS Stomach Smooth Muscle stomach
12 chr9:140499000-140500400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr9:140499000-140500600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
14 chr9:140499000-140500600 Active TSS Primary T regulatory cells fromperipheralblood blood
15 chr9:140499000-140500600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
16 chr9:140499000-140500800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr9:140499000-140500800 Active TSS HUES64 Cell Line embryonic stem cell
18 chr9:140499000-140500800 Active TSS Breast Myoepithelial Primary Cells Breast
19 chr9:140499000-140500800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr9:140499000-140500800 Active TSS Brain Anterior Caudate brain
21 chr9:140499000-140500800 Active TSS Brain Cingulate Gyrus brain
22 chr9:140499000-140500800 Active TSS A549 lung
23 chr9:140499000-140500800 Active TSS HUVEC blood vessel
24 chr9:140499000-140500800 Active TSS K562 blood
25 chr9:140499000-140501000 Active TSS Ovary ovary
26 chr9:140499000-140501200 Active TSS HUES48 Cell Line embryonic stem cell
27 chr9:140499000-140501400 Active TSS H9 Cell Line embryonic stem cell
28 chr9:140499000-140501800 Active TSS Pancreatic Islets Pancreatic Islet
29 chr9:140499200-140500000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
30 chr9:140499200-140500000 Weak transcription Dnd41 blood
31 chr9:140499200-140500200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr9:140499200-140500200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr9:140499200-140500200 Weak transcription Primary B cells from cord blood blood
34 chr9:140499200-140500200 Active TSS Primary hematopoietic stem cells short term culture blood
35 chr9:140499200-140500200 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr9:140499200-140500200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr9:140499200-140500200 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr9:140499200-140500200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
39 chr9:140499200-140500200 Active TSS Right Atrium heart
40 chr9:140499200-140500200 Weak transcription Stomach Mucosa stomach
41 chr9:140499200-140500400 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr9:140499200-140500400 Active TSS Cortex derived primary cultured neurospheres brain
43 chr9:140499200-140500400 Active TSS Brain Germinal Matrix brain
44 chr9:140499200-140500600 Active TSS HUES6 Cell Line embryonic stem cell
45 chr9:140499200-140500600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
46 chr9:140499200-140500600 Active TSS Primary hematopoietic stem cells blood
47 chr9:140499200-140500600 Active TSS Colonic Mucosa Colon
48 chr9:140499200-140500800 Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr9:140499200-140500800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr9:140499200-140500800 Active TSS iPS-20b Cell Line embryonic stem cell

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