The 2.0 version of rSNPBase

Variant report

Variant rs55678733
Chromosome Location chr16:81893839-81893840
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:81866800-81898600 Weak transcription Right Atrium heart
2 chr16:81871200-81897200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr16:81876200-81918200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr16:81880000-81911200 Weak transcription Pancreas Pancrea
5 chr16:81880400-81908200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr16:81882800-81897200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr16:81884400-81897200 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr16:81886200-81894400 Weak transcription Small Intestine intestine
9 chr16:81886400-81896400 Strong transcription Primary B cells from cord blood blood
10 chr16:81886600-81894600 Weak transcription Primary T cells fromperipheralblood blood
11 chr16:81887400-81894800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr16:81887600-81897000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr16:81887600-81901800 Weak transcription Fetal Kidney kidney
14 chr16:81887800-81897400 Weak transcription Rectal Smooth Muscle rectum
15 chr16:81887800-81899000 Strong transcription Primary hematopoietic stem cells short term culture blood
16 chr16:81888000-81894000 Weak transcription Liver Liver
17 chr16:81888000-81894200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
18 chr16:81888000-81896800 Strong transcription Primary monocytes fromperipheralblood blood
19 chr16:81888200-81897600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr16:81889200-81896200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr16:81889400-81896000 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr16:81889400-81896400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
23 chr16:81889600-81894400 Weak transcription Fetal Intestine Small intestine
24 chr16:81890200-81895000 Weak transcription Lung lung
25 chr16:81890200-81895200 Weak transcription Adipose Nuclei Adipose
26 chr16:81890200-81895200 Weak transcription Spleen Spleen
27 chr16:81890400-81895800 Strong transcription Primary B cells from peripheral blood blood
28 chr16:81890800-81894800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr16:81891600-81895000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr16:81892000-81900600 Weak transcription Thymus Thymus
31 chr16:81892800-81895000 Weak transcription Esophagus oesophagus
32 chr16:81893200-81894000 Weak transcription Breast Myoepithelial Primary Cells Breast
33 chr16:81893200-81894000 Weak transcription Primary hematopoietic stem cells blood
34 chr16:81893600-81895800 Enhancers Duodenum Mucosa Duodenum
35 chr16:81893800-81894800 Transcr. at gene 5' and 3' GM12878-XiMat blood

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Last update: Aug 31, 2015