The 2.0 version of rSNPBase

Variant report

Variant rs62044000
Chromosome Location chr16:81927776-81927777
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:81899000-81934600 Weak transcription Right Atrium heart
2 chr16:81901000-81929200 Weak transcription Brain Substantia Nigra brain
3 chr16:81902800-81955600 Weak transcription Fetal Kidney kidney
4 chr16:81905800-81943000 Weak transcription Small Intestine intestine
5 chr16:81908200-81936800 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr16:81908400-81950000 Strong transcription GM12878-XiMat blood
7 chr16:81908400-81950200 Strong transcription Primary B cells from peripheral blood blood
8 chr16:81909400-81961800 Strong transcription Primary neutrophils fromperipheralblood blood
9 chr16:81911400-81936400 Weak transcription Pancreas Pancrea
10 chr16:81913400-81934000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr16:81919400-81935600 Strong transcription Primary B cells from cord blood blood
12 chr16:81920400-81982000 Strong transcription Monocytes-CD14+_RO01746 blood
13 chr16:81921200-81935600 Strong transcription Primary monocytes fromperipheralblood blood
14 chr16:81921800-81932200 Strong transcription Spleen Spleen
15 chr16:81922400-81930200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr16:81922400-81944800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr16:81922800-81929200 Weak transcription Gastric stomach
18 chr16:81923000-81936800 Weak transcription Placenta Placenta
19 chr16:81923800-81934600 Weak transcription Thymus Thymus
20 chr16:81924000-81930200 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr16:81924200-81935600 Strong transcription Primary hematopoietic stem cells blood
22 chr16:81924200-81935600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr16:81924400-81934600 Weak transcription Left Ventricle heart
24 chr16:81924400-81935600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
25 chr16:81924400-81935600 Weak transcription Esophagus oesophagus
26 chr16:81924400-81938800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr16:81924400-81942400 Strong transcription Duodenum Mucosa Duodenum
28 chr16:81924400-81946200 Weak transcription H1 Cell Line embryonic stem cell
29 chr16:81924400-81961600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr16:81924400-81970000 Weak transcription Fetal Intestine Large intestine
31 chr16:81924600-81935600 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr16:81924800-81931800 Strong transcription Fetal Intestine Small intestine
33 chr16:81924800-81934200 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr16:81924800-81949200 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr16:81925000-81934600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr16:81925400-81949200 Weak transcription Right Ventricle heart
37 chr16:81925800-81928600 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr16:81925800-81929200 Weak transcription Primary T cells fromperipheralblood blood
39 chr16:81925800-81933400 Weak transcription Colonic Mucosa Colon
40 chr16:81925800-81936800 Weak transcription Rectal Smooth Muscle rectum
41 chr16:81925800-81992600 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr16:81926000-81929400 Weak transcription Adipose Nuclei Adipose
43 chr16:81926200-81929200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr16:81926200-81942600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr16:81926600-81928200 Strong transcription Fetal Stomach stomach
46 chr16:81926600-81930200 Strong transcription Liver Liver
47 chr16:81927000-81927800 Strong transcription Lung lung
48 chr16:81927200-81929400 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015