The 2.0 version of rSNPBase

Variant report

Variant rs62044878
Chromosome Location chr16:81948025-81948026
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:81902800-81955600 Weak transcription Fetal Kidney kidney
2 chr16:81908400-81950000 Strong transcription GM12878-XiMat blood
3 chr16:81908400-81950200 Strong transcription Primary B cells from peripheral blood blood
4 chr16:81909400-81961800 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr16:81920400-81982000 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr16:81924400-81961600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr16:81924400-81970000 Weak transcription Fetal Intestine Large intestine
8 chr16:81924800-81949200 Strong transcription Breast Myoepithelial Primary Cells Breast
9 chr16:81925400-81949200 Weak transcription Right Ventricle heart
10 chr16:81925800-81992600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr16:81928000-81953200 Weak transcription Fetal Thymus thymus
12 chr16:81930800-81953400 Weak transcription Primary T cells fromperipheralblood blood
13 chr16:81931000-81949800 Strong transcription Liver Liver
14 chr16:81933000-81983600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr16:81934600-81961200 Weak transcription Colonic Mucosa Colon
16 chr16:81934800-81971600 Weak transcription Right Atrium heart
17 chr16:81935000-81953000 Weak transcription Adipose Nuclei Adipose
18 chr16:81936000-81982000 Weak transcription Gastric stomach
19 chr16:81936000-81984600 Strong transcription Primary monocytes fromperipheralblood blood
20 chr16:81936400-81949400 Strong transcription Primary hematopoietic stem cells short term culture blood
21 chr16:81936800-81949400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr16:81936800-81951000 Strong transcription Primary B cells from cord blood blood
23 chr16:81937000-81969800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr16:81937200-81955000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr16:81941600-81966000 Weak transcription Placenta Placenta
26 chr16:81945000-81984600 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr16:81945600-81950800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
28 chr16:81946000-81949400 Strong transcription Duodenum Mucosa Duodenum
29 chr16:81946200-81948200 Strong transcription Fetal Adrenal Gland Adrenal Gland
30 chr16:81946200-81948600 Strong transcription Lung lung
31 chr16:81946200-81949000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr16:81946200-81985200 Weak transcription Rectal Smooth Muscle rectum
33 chr16:81946400-81949400 Strong transcription Primary hematopoietic stem cells blood
34 chr16:81946600-81958400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr16:81947000-81969200 Weak transcription Pancreas Pancrea
36 chr16:81947200-81955200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr16:81947800-81948800 Genic enhancers Spleen Spleen
38 chr16:81948000-81953600 Weak transcription Fetal Stomach stomach
39 chr16:81948000-81958200 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015