The 2.0 version of rSNPBase

Variant report

Variant rs55801253
Chromosome Location chr16:81896901-81896902
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:81866800-81898600 Weak transcription Right Atrium heart
2 chr16:81871200-81897200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr16:81876200-81918200 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr16:81880000-81911200 Weak transcription Pancreas Pancrea
5 chr16:81880400-81908200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr16:81882800-81897200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr16:81884400-81897200 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr16:81887600-81897000 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr16:81887600-81901800 Weak transcription Fetal Kidney kidney
10 chr16:81887800-81897400 Weak transcription Rectal Smooth Muscle rectum
11 chr16:81887800-81899000 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr16:81888200-81897600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr16:81892000-81900600 Weak transcription Thymus Thymus
14 chr16:81894000-81897000 Strong transcription Primary hematopoietic stem cells blood
15 chr16:81894400-81900400 Weak transcription Liver Liver
16 chr16:81894800-81897200 Genic enhancers GM12878-XiMat blood
17 chr16:81894800-81912400 Weak transcription Fetal Intestine Small intestine
18 chr16:81895200-81897200 Enhancers Adipose Nuclei Adipose
19 chr16:81895800-81897000 Weak transcription Duodenum Mucosa Duodenum
20 chr16:81895800-81897200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
21 chr16:81895800-81902600 Genic enhancers Primary B cells from peripheral blood blood
22 chr16:81896000-81897000 Weak transcription H1 Cell Line embryonic stem cell
23 chr16:81896000-81897200 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr16:81896000-81897200 Enhancers Breast Myoepithelial Primary Cells Breast
25 chr16:81896000-81897200 Weak transcription Spleen Spleen
26 chr16:81896000-81898200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr16:81896000-81900800 Weak transcription Esophagus oesophagus
28 chr16:81896200-81897600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr16:81896200-81898000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr16:81896200-81898000 Weak transcription HMEC breast
31 chr16:81896200-81900000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr16:81896400-81897000 Enhancers Primary neutrophils fromperipheralblood blood
33 chr16:81896400-81897600 Enhancers Duodenum Smooth Muscle Duodenum
34 chr16:81896400-81898400 Genic enhancers Primary B cells from cord blood blood
35 chr16:81896400-81898600 Weak transcription Lung lung
36 chr16:81896400-81900000 Weak transcription HUVEC blood vessel
37 chr16:81896400-81902400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr16:81896800-81897600 Genic enhancers Primary monocytes fromperipheralblood blood
39 chr16:81896800-81910400 Weak transcription Gastric stomach

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Last update: Aug 31, 2015