Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr16:11426543..11428854-chr9:94291625..94294247,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12347375	0.80[AMR][1000 genomes]
rs1332380	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1412466	0.84[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs1492679	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16907551	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs16907585	0.82[AMR][1000 genomes]
rs2131301	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4743840	0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55932694	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62562598	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs62562604	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72742834	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7467730	0.86[AMR][1000 genomes]
rs768056	0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7855644	0.83[AMR][1000 genomes]
rs902923	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9409420	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9409422	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9409424	0.84[EUR][1000 genomes]
rs9409427	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs9409600	0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94291200-94294200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr9:94292600-94294200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr9:94292800-94299800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr9:94293200-94295000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr9:94293200-94295600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr9:94293200-94298200	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr9:94293200-94300200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr9:94293200-94302000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr9:94293400-94298600	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr9:94293400-94298600	Weak transcription	Fetal Lung	lung
11	chr9:94293600-94296400	Weak transcription	Osteobl	bone
12	chr9:94293600-94297800	Weak transcription	A549	lung
13	chr9:94293600-94298000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr9:94293600-94298200	Weak transcription	NHLF	lung
15	chr9:94293600-94298400	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr9:94293600-94298600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
17	chr9:94294000-94294400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

Quick Search: