Variant report

No.	Distal block	Cell Line	Cell type
1	chr9:94332491..94335294-chr9:94337206..94339480,2	K562	blood:
2	chr9:94325270..94326833-chr9:94332082..94334751,2	MCF-7	breast:
3	chr9:94333406..94335605-chr9:94340946..94342619,2	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs12347375	0.81[EUR][1000 genomes]
rs1332380	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1492679	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs16907585	0.81[EUR][1000 genomes]
rs2131301	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4743840	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs55709852	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55932694	0.83[EUR][1000 genomes]
rs62562598	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs62562604	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72742834	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7467730	0.81[EUR][1000 genomes]
rs768056	0.81[AMR][1000 genomes]
rs7855644	0.81[EUR][1000 genomes]
rs9409420	0.93[EUR][1000 genomes]
rs9409422	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9409424	0.88[EUR][1000 genomes]
rs9409427	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[YRI][hapmap];0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9409600	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9409606	0.81[CEU][hapmap]
rs9409609	0.87[MEX][hapmap]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs902923	CDC42BPA	trans	parietal	SCAN

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:94320400-94333800	Weak transcription	Stomach Smooth Muscle	stomach
2	chr9:94331400-94334800	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr9:94332800-94333800	Weak transcription	Esophagus	oesophagus
4	chr9:94332800-94334200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr9:94333200-94333800	Bivalent Enhancer	Stomach Mucosa	stomach
6	chr9:94333200-94334600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr9:94333400-94333600	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr9:94333400-94333600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:94333400-94333600	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr9:94333400-94334000	Enhancers	Gastric	stomach

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