Variant report

Variant	rs55821336
Chromosome Location	chr4:54585031-54585032
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10007326	0.86[EUR][1000 genomes]
rs10028338	0.97[EUR][1000 genomes]
rs10031863	0.97[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs10049838	0.88[EUR][1000 genomes]
rs10517293	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs1551879	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1551881	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17676844	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17676926	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1903826	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28385358	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28408784	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28416484	0.86[EUR][1000 genomes]
rs28429195	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28439455	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28491549	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28523988	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28592900	0.86[EUR][1000 genomes]
rs28610185	0.88[EUR][1000 genomes]
rs28623562	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28631447	0.84[EUR][1000 genomes]
rs28694496	0.88[EUR][1000 genomes]
rs28716961	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55697814	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55980777	0.86[EUR][1000 genomes]
rs61561463	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73250990	0.94[EUR][1000 genomes]
rs73250992	0.94[EUR][1000 genomes]
rs73250993	0.94[EUR][1000 genomes]
rs73250995	0.88[EUR][1000 genomes]
rs73250998	0.88[EUR][1000 genomes]
rs73250999	0.88[EUR][1000 genomes]
rs73251000	0.86[EUR][1000 genomes]
rs73817107	0.88[EUR][1000 genomes]
rs9997817	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:54583200-54587400	Weak transcription	HSMM	muscle
2	chr4:54583400-54587400	Weak transcription	HSMMtube	muscle
3	chr4:54583800-54587400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr4:54584000-54587400	Weak transcription	NHDF-Ad	bronchial
5	chr4:54584000-54600000	Weak transcription	Osteobl	bone
6	chr4:54584400-54587600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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