Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:215088037..215089954-chr1:215093035..215095251,2	K562	blood:
2	chr1:215094543..215096510-chr1:215106179..215108957,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11120449	0.80[ASN][1000 genomes]
rs472961	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs475341	0.84[ASN][1000 genomes]
rs476910	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs477485	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs478664	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs494808	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs501475	0.84[ASN][1000 genomes]
rs506436	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs506765	0.84[ASN][1000 genomes]
rs512597	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs520394	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs520982	0.84[ASN][1000 genomes]
rs526746	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs527388	0.84[ASN][1000 genomes]
rs527769	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs534411	0.84[ASN][1000 genomes]
rs554343	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs557765	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs558728	0.87[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs559944	0.80[ASN][1000 genomes]
rs561766	0.84[ASN][1000 genomes]
rs562935	0.84[ASN][1000 genomes]
rs564291	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs6684902	0.80[ASN][1000 genomes]
rs6690944	0.80[ASN][1000 genomes]
rs896652	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873167	chr1:214950361-215116947	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215085800-215097800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:215092800-215096400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr1:215093600-215095200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr1:215094400-215094800	Enhancers	NHEK	skin
5	chr1:215094400-215095600	Enhancers	HMEC	breast
6	chr1:215094600-215095200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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