Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:64708596..64710189-chr14:64759071..64760713,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12432029	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12434245	1.00[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12435284	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28440970	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28659912	1.00[ASN][1000 genomes]
rs66969518	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs67991812	1.00[ASN][1000 genomes]
rs7145919	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7159462	1.00[AFR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72720372	0.89[EUR][1000 genomes]
rs72720375	0.89[EUR][1000 genomes]
rs72720376	0.89[EUR][1000 genomes]
rs72720380	0.89[EUR][1000 genomes]
rs72720382	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72722305	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722317	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722320	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72722324	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722326	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8004284	1.00[ASN][1000 genomes]
rs8004907	1.00[ASN][1000 genomes]
rs8005720	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8013331	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8020953	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8021944	0.89[EUR][1000 genomes]
rs8022694	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902019	chr14:64395569-64882380	Enhancers Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases
2	nsv456326	chr14:64420413-64754361	Strong transcription Weak transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	nsv564905	chr14:64420413-64754361	Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
4	nsv902021	chr14:64647646-64715794	Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64688800-64710600	Weak transcription	Fetal Heart	heart
2	chr14:64690200-64711200	Weak transcription	Colon Smooth Muscle	Colon
3	chr14:64698800-64716600	Weak transcription	Cortex derived primary cultured neurospheres	brain
4	chr14:64702600-64715400	Weak transcription	Fetal Stomach	stomach
5	chr14:64703200-64716800	Weak transcription	Brain Germinal Matrix	brain
6	chr14:64706000-64710600	Weak transcription	Ovary	ovary
7	chr14:64707400-64712800	Weak transcription	Thymus	Thymus
8	chr14:64707400-64715400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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