Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:64789559..64792915-chr14:64794645..64797859,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12432029	1.00[ASN][1000 genomes]
rs12435284	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1952586	0.95[EUR][1000 genomes]
rs28402888	0.95[EUR][1000 genomes]
rs28435160	0.84[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs28440970	1.00[ASN][1000 genomes]
rs28533821	0.81[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs55947517	1.00[ASN][1000 genomes]
rs6573551	0.92[EUR][1000 genomes]
rs66969518	1.00[ASN][1000 genomes]
rs67160339	0.82[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs67991812	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7159462	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722305	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722317	0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722320	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72722324	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72722326	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8004284	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8004907	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8005720	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8019025	0.81[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs8020953	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902019	chr14:64395569-64882380	Enhancers Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64792000-64803800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr14:64792000-64803800	Weak transcription	Osteobl	bone
3	chr14:64794000-64803200	Weak transcription	Hela-S3	cervix

Quick Search: