Variant report

Variant	rs55964818
Chromosome Location	chr8:130605871-130605872
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130605721..130608302-chr8:130609684..130611618,2	K562	blood:

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10098310	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10103048	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10107630	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12544501	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12676406	0.83[ASN][1000 genomes]
rs12676428	0.82[ASN][1000 genomes]
rs13277237	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13280084	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1368700	0.81[ASN][1000 genomes]
rs1579555	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs16904121	0.81[ASN][1000 genomes]
rs16904123	0.83[ASN][1000 genomes]
rs1865223	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2163952	0.90[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2217715	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2395905	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2395906	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28500514	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs28854585	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4291235	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4407843	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4480083	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4486162	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6470743	0.85[ASN][1000 genomes]
rs6989110	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7005227	0.81[ASN][1000 genomes]
rs996313	0.81[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
2	chr8:130602200-130606000	Enhancers	K562	blood
3	chr8:130602200-130606400	Enhancers	Fetal Muscle Leg	muscle
4	chr8:130602200-130606800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr8:130602400-130606400	Enhancers	Fetal Thymus	thymus
6	chr8:130603400-130606000	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr8:130603600-130606000	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr8:130605000-130606400	Enhancers	Fetal Muscle Trunk	muscle
9	chr8:130605000-130606600	Flanking Active TSS	Dnd41	blood
10	chr8:130605200-130606000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr8:130605400-130606200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr8:130605600-130606000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr8:130605800-130606000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood

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