Variant report

Variant	rs12676406
Chromosome Location	chr8:130608634-130608635
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:130608180..130609853-chr8:130686096..130687708,2	K562	blood:
2	chr8:130603530..130605537-chr8:130607519..130610435,2	K562	blood:

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs11785889	0.89[ASN][1000 genomes]
rs12542190	0.80[ASN][1000 genomes]
rs12544501	0.83[ASN][1000 genomes]
rs12548063	0.80[ASN][1000 genomes]
rs12676428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1368700	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1433577	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1433580	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1579555	0.81[ASN][1000 genomes]
rs1583333	0.94[ASN][1000 genomes]
rs16904121	0.94[ASN][1000 genomes]
rs16904123	0.99[ASN][1000 genomes]
rs1946627	0.88[ASN][1000 genomes]
rs2043404	0.80[ASN][1000 genomes]
rs2395905	0.83[ASN][1000 genomes]
rs28500514	0.83[ASN][1000 genomes]
rs28854585	0.80[ASN][1000 genomes]
rs4407843	0.82[ASN][1000 genomes]
rs4480083	0.83[ASN][1000 genomes]
rs4486162	0.80[ASN][1000 genomes]
rs55964818	0.83[ASN][1000 genomes]
rs6470743	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6982553	0.80[ASN][1000 genomes]
rs6989110	0.82[ASN][1000 genomes]
rs7000230	0.85[ASN][1000 genomes]
rs7000289	0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7000320	0.80[ASN][1000 genomes]
rs7005227	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7008811	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9642890	0.80[ASN][1000 genomes]
rs996313	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130606400-130609200	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
2	chr8:130608200-130609200	Enhancers	Dnd41	blood

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