Variant report

Variant	rs7005227
Chromosome Location	chr8:130597858-130597859
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:130596612..130598403-chr8:130600506..130602014,2	K562	blood:
2	chr8:130592934..130595318-chr8:130597344..130598932,2	K562	blood:
3	chr8:130438496..130440259-chr8:130595633..130598498,2	K562	blood:

Extended variants
information (count: 49 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10098310	0.81[JPT][hapmap]
rs10103048	0.81[JPT][hapmap]
rs10107630	0.86[JPT][hapmap]
rs10956485	0.96[CEU][hapmap];0.92[CHB][hapmap];0.86[JPT][hapmap];0.95[YRI][hapmap]
rs11785889	0.91[CHB][hapmap];0.86[JPT][hapmap];0.92[ASN][1000 genomes]
rs12542190	0.87[CHB][hapmap];0.82[ASN][1000 genomes]
rs12544501	0.81[ASN][1000 genomes]
rs12548063	0.82[ASN][1000 genomes]
rs12676406	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12676428	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12677963	0.86[CHB][hapmap];0.81[ASN][1000 genomes]
rs12681229	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13277237	0.86[JPT][hapmap]
rs1368700	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1433577	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1433580	1.00[CEU][hapmap];0.92[CHB][hapmap];0.86[JPT][hapmap];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1583333	1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[ASN][1000 genomes]
rs1594774	0.81[ASN][1000 genomes]
rs16904119	0.87[CEU][hapmap];0.87[CHB][hapmap];0.81[ASN][1000 genomes]
rs16904121	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs16904123	1.00[CHB][hapmap];0.95[JPT][hapmap];0.94[ASN][1000 genomes]
rs1865223	0.86[JPT][hapmap]
rs1946627	0.83[ASN][1000 genomes]
rs2043404	0.82[ASN][1000 genomes]
rs2163952	0.81[JPT][hapmap]
rs2395906	0.81[JPT][hapmap]
rs4319050	0.81[ASN][1000 genomes]
rs4407843	0.95[JPT][hapmap]
rs4480083	0.95[JPT][hapmap]
rs55964818	0.81[ASN][1000 genomes]
rs59292525	0.81[ASN][1000 genomes]
rs61453473	0.81[ASN][1000 genomes]
rs6470742	0.82[CEU][hapmap];0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs6470743	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[YRI][hapmap];0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6982371	0.81[ASN][1000 genomes]
rs6982553	0.86[CEU][hapmap];0.95[CHB][hapmap];0.84[JPT][hapmap];0.82[ASN][1000 genomes]
rs7000230	0.88[ASN][1000 genomes]
rs7000289	1.00[CEU][hapmap];0.95[CHB][hapmap];0.82[JPT][hapmap];0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7000320	0.87[CEU][hapmap];0.87[CHB][hapmap];0.82[ASN][1000 genomes]
rs7000372	0.87[CEU][hapmap];0.86[CHB][hapmap]
rs7006214	0.81[ASN][1000 genomes]
rs7008811	1.00[CEU][hapmap];0.95[CHB][hapmap];0.86[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7011870	0.87[CEU][hapmap];0.87[CHB][hapmap];0.81[ASN][1000 genomes]
rs72609887	0.80[ASN][1000 genomes]
rs7840067	0.87[CEU][hapmap];0.87[CHB][hapmap];0.81[ASN][1000 genomes]
rs7840212	0.80[CEU][hapmap]
rs7846327	0.87[CEU][hapmap];0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs9642890	0.82[ASN][1000 genomes]
rs996313	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592400-130601200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr8:130592600-130603600	Enhancers	Dnd41	blood
3	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
4	chr8:130594800-130599000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:130595200-130602200	Weak transcription	Thymus	Thymus
6	chr8:130595200-130605800	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr8:130595600-130599000	Weak transcription	H9 Cell Line	embryonic stem cell
8	chr8:130595600-130603400	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr8:130596000-130603600	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr8:130596200-130598800	Weak transcription	Fetal Muscle Leg	muscle
11	chr8:130596800-130599800	Enhancers	K562	blood
12	chr8:130597200-130599600	Enhancers	ES-I3 Cell Line	embryonic stem cell
13	chr8:130597400-130598000	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr8:130597400-130598200	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr8:130597400-130598800	Weak transcription	Fetal Thymus	thymus
16	chr8:130597400-130599400	Enhancers	iPS-18 Cell Line	embryonic stem cell
17	chr8:130597400-130600000	Enhancers	iPS-15b Cell Line	embryonic stem cell
18	chr8:130597800-130598200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
19	chr8:130597800-130598600	Weak transcription	iPS-20b Cell Line	embryonic stem cell

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