Variant report

Variant	rs2043404
Chromosome Location	chr8:130575854-130575855
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:129858313..129861214-chr8:130574284..130576982,2	K562	blood:
2	chr8:130567489..130570221-chr8:130575733..130577492,2	MCF-7	breast:

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10094039	0.81[ASN][1000 genomes]
rs10956482	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10956483	0.92[ASN][1000 genomes]
rs11785889	0.88[ASN][1000 genomes]
rs12542190	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12548063	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12676406	0.80[ASN][1000 genomes]
rs12677963	0.80[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1368700	0.82[ASN][1000 genomes]
rs1433577	0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs1433580	0.88[ASN][1000 genomes]
rs1594774	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16904119	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16904121	0.82[ASN][1000 genomes]
rs1946627	0.81[ASN][1000 genomes]
rs4319050	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs57924547	0.91[ASN][1000 genomes]
rs59292525	0.94[ASN][1000 genomes]
rs61453473	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6470739	0.85[EUR][1000 genomes]
rs6470742	0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6982371	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6982553	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7000230	0.91[ASN][1000 genomes]
rs7000289	0.91[ASN][1000 genomes]
rs7000320	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7000372	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7005227	0.82[ASN][1000 genomes]
rs7006214	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7008811	0.89[ASN][1000 genomes]
rs7011870	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7014560	0.81[EUR][1000 genomes]
rs72609887	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7829245	0.83[EUR][1000 genomes]
rs7831493	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7840067	0.85[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7846327	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs892350	0.83[EUR][1000 genomes]
rs892351	0.83[EUR][1000 genomes]
rs9642890	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs996313	0.81[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130568800-130587000	Weak transcription	Thymus	Thymus
2	chr8:130574600-130576200	Strong transcription	K562	blood
3	chr8:130575400-130578000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr8:130575600-130577800	Enhancers	Dnd41	blood

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