Variant report

Variant	rs1433577
Chromosome Location	chr8:130595881-130595882
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:128748142..128750847-chr8:130594288..130596235,2	K562	blood:
2	chr8:130594791..130597296-chr8:130688506..130690853,2	K562	blood:
3	chr8:130595446..130597443-chr8:130678886..130681911,3	K562	blood:
4	chr8:130595589..130597194-chr8:130700231..130702653,2	K562	blood:
5	chr8:130583915..130590962-chr8:130591367..130597436,13	K562	blood:
6	chr8:130593017..130595980-chr8:130602538..130604620,4	K562	blood:
7	chr8:130595051..130596781-chr8:130609600..130612283,2	K562	blood:
8	chr8:130438496..130440259-chr8:130595633..130598498,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000136997	Chromatin interaction
ENSG00000229140	Chromatin interaction

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10094039	1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs10098310	0.86[JPT][hapmap]
rs10103048	0.95[JPT][hapmap]
rs10107630	0.90[JPT][hapmap]
rs10956483	0.91[CHB][hapmap];0.95[JPT][hapmap];0.89[ASN][1000 genomes]
rs10956485	0.96[CEU][hapmap];0.96[CHB][hapmap];0.90[JPT][hapmap]
rs11785889	0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs12542190	1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs12548063	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12676406	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs12676428	0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12677963	0.95[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs12681229	0.87[CHB][hapmap]
rs13277237	0.90[JPT][hapmap]
rs1368700	1.00[CEU][hapmap];0.91[CHB][hapmap];0.81[JPT][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1433580	1.00[CEU][hapmap];0.96[CHB][hapmap];0.90[JPT][hapmap];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1583333	0.91[CHB][hapmap]
rs1594774	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs16904119	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs16904121	0.91[CHB][hapmap];0.83[ASN][1000 genomes]
rs16904123	0.91[CHB][hapmap];0.81[JPT][hapmap];0.81[ASN][1000 genomes]
rs1865223	0.90[JPT][hapmap]
rs1946627	0.84[ASN][1000 genomes]
rs2043404	0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs2163952	0.95[JPT][hapmap]
rs2395906	0.95[JPT][hapmap]
rs4319050	0.98[ASN][1000 genomes]
rs4407843	0.82[JPT][hapmap]
rs4480083	0.82[JPT][hapmap]
rs57924547	0.93[ASN][1000 genomes]
rs59292525	0.96[ASN][1000 genomes]
rs61453473	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6470742	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.92[AFR][1000 genomes];0.81[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6470743	0.95[CEU][hapmap];0.91[CHB][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6982371	0.97[ASN][1000 genomes]
rs6982553	0.86[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs7000230	0.92[ASN][1000 genomes]
rs7000289	1.00[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.80[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7000320	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs7000372	0.87[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs7005227	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7006214	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs7008811	1.00[CEU][hapmap];0.95[CHB][hapmap];0.90[JPT][hapmap];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7011870	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs72609887	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7831493	0.92[ASN][1000 genomes]
rs7840067	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.98[ASN][1000 genomes]
rs7840212	0.80[CEU][hapmap]
rs7846327	0.87[CEU][hapmap];1.00[CHB][hapmap];0.86[JPT][hapmap];0.98[ASN][1000 genomes]
rs9642890	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs996313	1.00[CEU][hapmap];0.87[CHB][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.84[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592400-130601200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr8:130592600-130603600	Enhancers	Dnd41	blood
3	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
4	chr8:130593800-130596800	Flanking Active TSS	K562	blood
5	chr8:130594000-130596200	Enhancers	Fetal Muscle Leg	muscle
6	chr8:130594800-130599000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr8:130595000-130596000	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr8:130595200-130602200	Weak transcription	Thymus	Thymus
9	chr8:130595200-130605800	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr8:130595600-130596800	Weak transcription	Fetal Thymus	thymus
11	chr8:130595600-130599000	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr8:130595600-130603400	Weak transcription	Primary monocytes fromperipheralblood	blood
13	chr8:130595800-130597200	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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