Variant report
| Variant | rs1946627 |
|---|---|
| Chromosome Location | chr8:130613493-130613494 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:40)
| rs_ID | r2[population] |
|---|---|
| rs10098310 | 0.84[ASN][1000 genomes] |
| rs11785889 | 0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes] |
| rs12542190 | 0.83[ASN][1000 genomes] |
| rs12548063 | 0.81[ASN][1000 genomes] |
| rs12676406 | 0.88[ASN][1000 genomes] |
| rs12676428 | 0.89[ASN][1000 genomes] |
| rs12677963 | 0.81[ASN][1000 genomes] |
| rs13280084 | 0.84[ASN][1000 genomes] |
| rs1368700 | 0.83[ASN][1000 genomes] |
| rs1433577 | 0.84[ASN][1000 genomes] |
| rs1433580 | 0.91[ASN][1000 genomes] |
| rs1433585 | 0.83[EUR][1000 genomes] |
| rs1583333 | 1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes] |
| rs1594774 | 0.82[ASN][1000 genomes] |
| rs16904119 | 0.81[ASN][1000 genomes] |
| rs16904121 | 0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.84[ASN][1000 genomes] |
| rs16904123 | 0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes] |
| rs16904126 | 0.82[EUR][1000 genomes] |
| rs2043404 | 0.81[ASN][1000 genomes] |
| rs2163952 | 0.81[ASN][1000 genomes] |
| rs2217715 | 0.86[ASN][1000 genomes] |
| rs2395906 | 0.81[ASN][1000 genomes] |
| rs4319050 | 0.82[ASN][1000 genomes] |
| rs59292525 | 0.81[ASN][1000 genomes] |
| rs61453473 | 0.82[ASN][1000 genomes] |
| rs6470742 | 0.82[ASN][1000 genomes] |
| rs6470743 | 0.87[ASN][1000 genomes] |
| rs6982371 | 0.81[ASN][1000 genomes] |
| rs6982553 | 0.81[ASN][1000 genomes] |
| rs7000230 | 0.90[EUR][1000 genomes];0.87[ASN][1000 genomes] |
| rs7000289 | 0.89[ASN][1000 genomes] |
| rs7000320 | 0.81[ASN][1000 genomes] |
| rs7005227 | 0.83[ASN][1000 genomes] |
| rs7006214 | 0.82[ASN][1000 genomes] |
| rs7008811 | 0.90[ASN][1000 genomes] |
| rs7011870 | 0.82[ASN][1000 genomes] |
| rs7840067 | 0.82[ASN][1000 genomes] |
| rs7846327 | 0.82[ASN][1000 genomes] |
| rs9642890 | 0.81[ASN][1000 genomes] |
| rs996313 | 0.84[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr8:130613000-130617200 | ZNF genes & repeats | Dnd41 | blood |
