Variant report

Variant	rs1594774
Chromosome Location	chr8:130593086-130593087
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:130592934..130595318-chr8:130597344..130598932,2	K562	blood:
2	chr8:128746422..128748430-chr8:130592546..130594989,2	K562	blood:
3	chr8:130583915..130590962-chr8:130591367..130597436,13	K562	blood:
4	chr8:130593017..130595980-chr8:130602538..130604620,4	K562	blood:
5	chr8:130561706..130563551-chr8:130592862..130594645,2	K562	blood:

Variant related genes	Relation type
ENSG00000229140	Chromatin interaction
ENSG00000136997	Chromatin interaction

Extended variants
information (count: 40 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10094039	0.81[ASN][1000 genomes]
rs10956482	0.85[EUR][1000 genomes]
rs10956483	0.91[ASN][1000 genomes]
rs11785889	0.88[ASN][1000 genomes]
rs12542190	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12548063	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12677963	0.80[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1368700	0.81[ASN][1000 genomes]
rs1433577	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs1433580	0.89[ASN][1000 genomes]
rs16904119	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs16904121	0.81[ASN][1000 genomes]
rs1946627	0.82[ASN][1000 genomes]
rs2043404	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4319050	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57924547	0.95[ASN][1000 genomes]
rs59292525	0.82[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs61453473	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6470739	0.85[EUR][1000 genomes]
rs6470742	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6982371	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6982553	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7000230	0.90[ASN][1000 genomes]
rs7000289	0.90[ASN][1000 genomes]
rs7000320	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7000372	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7005227	0.81[ASN][1000 genomes]
rs7006214	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7008811	0.88[ASN][1000 genomes]
rs7011870	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7014560	0.80[EUR][1000 genomes]
rs72609887	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7829245	0.82[EUR][1000 genomes]
rs7831493	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7840067	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7846327	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs892350	0.82[EUR][1000 genomes]
rs892351	0.82[EUR][1000 genomes]
rs9642890	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs996313	0.82[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130592400-130593800	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr8:130592400-130593800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr8:130592400-130601200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr8:130592600-130595400	Enhancers	Primary neutrophils fromperipheralblood	blood
5	chr8:130592600-130603600	Enhancers	Dnd41	blood
6	chr8:130592600-130607000	Enhancers	Primary hematopoietic stem cells	blood
7	chr8:130592800-130593200	Enhancers	K562	blood

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