Variant report
| Variant | rs56083972 |
|---|---|
| Chromosome Location | chr3:24529905-24529906 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:24509600-24531000 | Weak transcription | Fetal Lung | lung |
| 2 | chr3:24515600-24533200 | Weak transcription | Stomach Mucosa | stomach |
| 3 | chr3:24519400-24532800 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr3:24523000-24534000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 5 | chr3:24525200-24531800 | Enhancers | Liver | Liver |
| 6 | chr3:24525600-24530800 | Weak transcription | Spleen | Spleen |
| 7 | chr3:24525600-24531200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 8 | chr3:24525600-24531800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 9 | chr3:24525600-24533800 | Weak transcription | Brain Angular Gyrus | brain |
| 10 | chr3:24525800-24531000 | Weak transcription | K562 | blood |
| 11 | chr3:24526600-24530200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 12 | chr3:24526800-24534000 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 13 | chr3:24527000-24530200 | Enhancers | HMEC | breast |
| 14 | chr3:24527200-24531200 | Weak transcription | Hela-S3 | cervix |
| 15 | chr3:24527600-24531000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 16 | chr3:24527600-24535400 | Weak transcription | Lung | lung |
| 17 | chr3:24527800-24531600 | Weak transcription | Brain Germinal Matrix | brain |
| 18 | chr3:24527800-24531600 | Weak transcription | Right Atrium | heart |
| 19 | chr3:24527800-24531800 | Weak transcription | Pancreas | Pancrea |
| 20 | chr3:24527800-24533600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 21 | chr3:24528000-24531800 | Weak transcription | Gastric | stomach |
| 22 | chr3:24528000-24532000 | Weak transcription | Left Ventricle | heart |
| 23 | chr3:24528200-24530800 | Weak transcription | Right Ventricle | heart |
| 24 | chr3:24528800-24530000 | Enhancers | Fetal Intestine Small | intestine |
| 25 | chr3:24528800-24531000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 26 | chr3:24529000-24532400 | Enhancers | Psoas Muscle | Psoas |
| 27 | chr3:24529400-24530400 | Weak transcription | Adipose Nuclei | Adipose |
| 28 | chr3:24529400-24530800 | Weak transcription | Fetal Intestine Large | intestine |
| 29 | chr3:24529400-24535000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 30 | chr3:24529600-24530800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 31 | chr3:24529600-24530800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 32 | chr3:24529800-24530000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 33 | chr3:24529800-24530800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 34 | chr3:24529800-24530800 | Weak transcription | Colon Smooth Muscle | Colon |
| 35 | chr3:24529800-24530800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 36 | chr3:24529800-24530800 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 37 | chr3:24529800-24530800 | Weak transcription | HepG2 | liver |
| 38 | chr3:24529800-24531000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 39 | chr3:24529800-24531200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 40 | chr3:24529800-24531800 | Weak transcription | Aorta | Aorta |
| 41 | chr3:24529800-24533000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 42 | chr3:24529800-24534000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 43 | chr3:24529800-24534400 | Weak transcription | NHDF-Ad | bronchial |
| 44 | chr3:24529800-24535200 | Weak transcription | NHEK | skin |
