The 2.0 version of rSNPBase

Variant report

Variant rs56127319
Chromosome Location chr2:191296429-191296430
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
3 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
4 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
5 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
7 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
8 chr2:191279200-191303000 Weak transcription NHEK skin
9 chr2:191281400-191296800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:191281400-191298600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr2:191281800-191296800 Weak transcription Small Intestine intestine
12 chr2:191282200-191296800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr2:191282400-191297000 Weak transcription Ovary ovary
14 chr2:191282600-191297000 Weak transcription Fetal Muscle Leg muscle
15 chr2:191282800-191301200 Weak transcription Fetal Brain Male brain
16 chr2:191283200-191301000 Weak transcription Fetal Muscle Trunk muscle
17 chr2:191284200-191301000 Weak transcription Gastric stomach
18 chr2:191284200-191301200 Weak transcription Right Ventricle heart
19 chr2:191284200-191311000 Weak transcription Psoas Muscle Psoas
20 chr2:191285600-191301000 Weak transcription Colon Smooth Muscle Colon
21 chr2:191287000-191300800 Weak transcription Brain Germinal Matrix brain
22 chr2:191290400-191301200 Weak transcription Brain Anterior Caudate brain
23 chr2:191290800-191300800 Weak transcription Brain Cingulate Gyrus brain
24 chr2:191291000-191296800 Weak transcription K562 blood
25 chr2:191291600-191299800 Weak transcription Primary monocytes fromperipheralblood blood
26 chr2:191292000-191296600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr2:191292000-191296800 Weak transcription Thymus Thymus
28 chr2:191292200-191296600 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr2:191292200-191296600 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr2:191292200-191296800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr2:191292200-191297000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr2:191292200-191297000 Weak transcription Aorta Aorta
33 chr2:191292200-191298600 Weak transcription Lung lung
34 chr2:191292200-191299600 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr2:191292200-191300800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr2:191292200-191301000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr2:191292400-191296800 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr2:191292800-191296800 Weak transcription Fetal Stomach stomach
39 chr2:191293200-191296600 Weak transcription Brain Hippocampus Middle brain
40 chr2:191293200-191296800 Weak transcription Primary T cells from cord blood blood
41 chr2:191293200-191299800 Weak transcription Primary B cells from cord blood blood
42 chr2:191293200-191301000 Weak transcription Brain Inferior Temporal Lobe brain
43 chr2:191293200-191301200 Weak transcription Brain Substantia Nigra brain
44 chr2:191293200-191301600 Weak transcription A549 lung
45 chr2:191293400-191300600 Weak transcription Dnd41 blood
46 chr2:191294200-191296800 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr2:191296200-191297200 Enhancers Primary T helper cells fromperipheralblood blood
48 chr2:191296200-191297400 Enhancers Primary T cells fromperipheralblood blood
49 chr2:191296200-191298400 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr2:191296400-191296600 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015