The 2.0 version of rSNPBase

Variant report

Variant rs62180992
Chromosome Location chr2:191285732-191285733
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:191273800-191301400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:191274200-191291600 Weak transcription Fetal Stomach stomach
3 chr2:191274600-191291400 Weak transcription Fetal Intestine Large intestine
4 chr2:191274800-191286000 Enhancers Primary T killer naive cells fromperipheralblood blood
5 chr2:191274800-191300800 Weak transcription Stomach Smooth Muscle stomach
6 chr2:191277400-191291400 Weak transcription Fetal Intestine Small intestine
7 chr2:191278400-191291200 Weak transcription Fetal Brain Female brain
8 chr2:191278400-191291600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr2:191278600-191301200 Weak transcription Pancreas Pancrea
10 chr2:191278800-191290000 Weak transcription K562 blood
11 chr2:191278800-191300800 Weak transcription Fetal Thymus thymus
12 chr2:191278800-191301200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr2:191279000-191296800 Weak transcription Duodenum Mucosa Duodenum
14 chr2:191279000-191300800 Weak transcription Esophagus oesophagus
15 chr2:191279200-191303000 Weak transcription NHEK skin
16 chr2:191279400-191296400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr2:191280400-191291400 Weak transcription Thymus Thymus
18 chr2:191280400-191296400 Weak transcription Spleen Spleen
19 chr2:191280800-191296400 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr2:191281400-191291600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr2:191281400-191292800 Weak transcription Dnd41 blood
22 chr2:191281400-191296800 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr2:191281400-191298600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr2:191281600-191290000 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr2:191281800-191296800 Weak transcription Small Intestine intestine
26 chr2:191282200-191289400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:191282200-191296800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr2:191282400-191297000 Weak transcription Ovary ovary
29 chr2:191282600-191297000 Weak transcription Fetal Muscle Leg muscle
30 chr2:191282800-191301200 Weak transcription Fetal Brain Male brain
31 chr2:191283000-191289800 Weak transcription Brain Anterior Caudate brain
32 chr2:191283000-191292800 Weak transcription Brain Inferior Temporal Lobe brain
33 chr2:191283200-191289600 Weak transcription Primary T cells from cord blood blood
34 chr2:191283200-191301000 Weak transcription Fetal Muscle Trunk muscle
35 chr2:191283600-191286400 Weak transcription Primary T helper naive cells from peripheral blood blood
36 chr2:191283800-191286800 Weak transcription Brain Hippocampus Middle brain
37 chr2:191283800-191289600 Weak transcription Brain Cingulate Gyrus brain
38 chr2:191284000-191290000 Weak transcription Primary B cells from cord blood blood
39 chr2:191284000-191296400 Weak transcription Primary B cells from peripheral blood blood
40 chr2:191284200-191286200 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr2:191284200-191286600 Strong transcription Primary T cells fromperipheralblood blood
42 chr2:191284200-191287000 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr2:191284200-191289800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr2:191284200-191291600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr2:191284200-191291600 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr2:191284200-191296400 Weak transcription Left Ventricle heart
47 chr2:191284200-191301000 Weak transcription Gastric stomach
48 chr2:191284200-191301200 Weak transcription Right Ventricle heart
49 chr2:191284200-191311000 Weak transcription Psoas Muscle Psoas
50 chr2:191284400-191289400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015